Disease: Progressive supranuclear palsy
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs121912438
SOD1
0.605 0.520 21 31667299 missense variant G/A;C;T snv 1.2E-05; 8.0E-06 58
rs63751273
MAPT
0.645 0.280 17 46010389 missense variant C/T snv 42
rs63750424
MAPT
0.677 0.240 17 46024061 missense variant C/T snv 1.6E-05 30
rs75932628
LOC105375056 ; TREM2
0.662 0.480 6 41161514 missense variant C/A;T snv 6.8E-05; 2.6E-03 28
rs1475170339
IGFALS ; SPSB3
0.732 0.240 16 1792325 missense variant T/C;G snv 18
rs143624519
MAPT
0.724 0.240 17 45991484 missense variant G/A;T snv 1.5E-03; 1.2E-05 17
rs3849942
C9orf72 ; LOC107987057
0.776 0.200 9 27543283 non coding transcript exon variant T/A;C snv 9
rs63749855
MAPT
0.790 0.200 17 46014271 missense variant T/G snv 8
rs72824905
PLCG2
0.827 0.200 16 81908423 missense variant C/G;T snv 5.2E-03 6
rs762046989
MAPT
0.851 0.200 17 45971867 missense variant C/G snv 8.0E-06 5
rs4239633
UNC13A
0.851 0.240 19 17631660 intron variant C/T snv 0.32 4
rs1026683055
GRN
0.882 0.200 17 44351429 missense variant C/T snv 1.6E-05 1.5E-05 3
rs1038579230
VCP
0.882 0.200 9 35067913 missense variant C/A snv 3
rs13302855 0.882 0.200 9 27595997 intergenic variant C/T snv 7.5E-02 3
rs1816
KANSL1
0.882 0.200 17 46199252 intron variant A/G snv 0.14 3
rs201795631
SETX
0.882 0.200 9 132349336 missense variant T/C;G snv 8.0E-06; 8.0E-06 3
rs762104961
MAPT
0.882 0.200 17 46024014 missense variant C/T snv 4.0E-06 3