Disease: Non-Small Cell Lung Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs104894230
HRAS ; LRRC56
0.564 0.600 11 534288 missense variant C/A;G;T snv 73
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 34
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs121913530
KRAS
0.583 0.640 12 25245351 missense variant C/A;G;T snv 63
rs12947788
TP53
0.776 0.280 17 7674109 intron variant G/A snv 0.10 8
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs3749474
TMEM165 ; CLOCK
0.724 0.320 4 55434518 3 prime UTR variant C/T snv 0.33 17
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs401681
CLPTM1L
0.620 0.640 5 1321972 intron variant C/T snv 0.48 42
rs7164773
RORA
0.790 0.240 15 60775749 intron variant C/A;T snv 10
rs727503094
LRRC56 ; HRAS
0.633 0.440 11 534287 missense variant GC/AG;AT;TA;TT mnv 41
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs9582036
FLT1
0.776 0.280 13 28311271 intron variant C/A snv 0.59 8
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs752967378
RAF1
0.882 0.160 3 12618580 missense variant G/A;C snv 4.0E-06 3
rs1800440
CYP1B1
0.653 0.440 2 38070996 missense variant T/C;G snv 0.15; 4.0E-06 29
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37