Disease: Malignant neoplasm of stomach
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs11655237
LINC00511 ; LINC00673
0.724 0.280 17 72404025 non coding transcript exon variant C/T snv 0.16 17
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs1859168
HOTTIP
0.790 0.160 7 27202740 non coding transcript exon variant A/C;G;T snv 13
rs2094258
ERCC5 ; BIVM-ERCC5
0.701 0.280 13 102844409 intron variant C/T snv 0.18 20
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs3790843
NR5A2
0.827 0.160 1 200041696 intron variant C/T snv 0.29 7
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4759314
HOTAIR
0.649 0.440 12 53968051 non coding transcript exon variant G/A snv 0.93 31
rs505922
ABO
0.689 0.520 9 133273813 intron variant C/T snv 34
rs587778883
MLH1
0.807 0.200 3 37025648 frameshift variant A/- del 7
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs889312 0.732 0.360 5 56736057 regulatory region variant C/A snv 0.69 14
rs9502893 0.827 0.120 6 1339954 intergenic variant C/G;T snv 5
rs9564966 0.851 0.120 13 73322084 intergenic variant A/G snv 0.52 4
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42 72
rs1458766475
C1orf112 ; SELE
0.637 0.680 1 169732649 missense variant C/G;T snv 4.0E-06; 4.0E-06 41
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs1799793
ERCC2
0.557 0.640 19 45364001 missense variant C/A;T snv 7.1E-06; 0.29 72
rs5361
SELE ; C1orf112
0.623 0.720 1 169731919 missense variant T/G snv 8.3E-02; 8.0E-06 7.8E-02 47
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78