Disease: Pancreatic carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs34852782
PRKAG2
0.925 0.120 7 151869086 intron variant -/A;AG ins 2
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs587778883
MLH1
0.807 0.200 3 37025648 frameshift variant A/- del 7
rs1194611372
S100A11
0.763 0.320 1 152032679 missense variant A/C snv 9
rs1131691021
TP53
0.716 0.120 17 7675097 missense variant A/C;G snv 21
rs17879961
CHEK2
0.597 0.480 22 28725099 missense variant A/C;G snv 4.1E-03 53
rs2239186
VDR
0.882 0.120 12 47875627 intron variant A/C;G snv 0.17 5
rs3790844
NR5A2
0.882 0.200 1 200038304 intron variant A/C;G snv 4
rs879254154
PALB2
0.851 0.160 16 23621428 missense variant A/C;G snv 4
rs1859168
HOTTIP
0.790 0.160 7 27202740 non coding transcript exon variant A/C;G;T snv 13
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs6475609
CDKN2B-AS1
0.925 0.120 9 22106272 intron variant A/C;G;T snv 2
rs2237895
KCNQ1
0.790 0.240 11 2835964 intron variant A/C;T snv 10
rs1049074086
CTSD
0.925 0.120 11 1759567 missense variant A/G snv 7.0E-06 9
rs10741657
CYP2R1
0.637 0.520 11 14893332 upstream gene variant A/G snv 0.65 34
rs11039149
NR1H3
0.827 0.280 11 47255124 intron variant A/G snv 0.19 6
rs11085754
SMARCA4
0.925 0.120 19 11017920 intron variant A/G snv 0.41 2
rs11615
ERCC1
0.572 0.640 19 45420395 synonymous variant A/G snv 0.50 0.55 62
rs1209809979
AKR1A1
0.925 0.120 1 45568989 missense variant A/G snv 4.0E-06 3
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1223231582
PRSS1
0.677 0.280 7 142750639 missense variant A/G snv 7.0E-06 24
rs12456874
LDLRAD4
0.925 0.120 18 13366863 intron variant A/G snv 0.20 2
rs1318
LOC101928045 ; PITPNC1
0.925 0.120 17 67695266 3 prime UTR variant A/G snv 0.30 2
rs138147246
OGG1
0.925 0.120 3 9756551 synonymous variant A/G snv 8.0E-06 1.4E-05 2
rs1547374
LOC105372815
0.925 0.120 21 42358786 downstream gene variant A/G snv 0.32 2