Disease: Neoplasms
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs5742612
LOC105369944 ; IGF1
0.752 0.440 12 102481086 intron variant A/G snv 5.6E-02 11
rs35767
IGF1 ; LOC105369944
0.763 0.360 12 102481791 upstream gene variant A/C;G;T snv 13
rs7965399
LOC105369944
0.851 0.120 12 102497908 regulatory region variant T/A;C snv 5
rs11568818
MMP7
0.763 0.280 11 102530930 upstream gene variant T/A;C snv 15
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 97
rs1047768
ERCC5 ; BIVM-ERCC5
0.695 0.320 13 102852167 synonymous variant T/C snv 0.52 0.59 20
rs17655
BIVM-ERCC5 ; ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30 52
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 103
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54
rs4988483
SSTR5-AS1 ; SSTR5
0.752 0.240 16 1079010 missense variant C/A snv 3.7E-02 3.7E-02 11
rs1801516
ATM
0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 37
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78 24
rs768623239
GSTM1 ; GSTM2
0.662 0.640 1 109689278 missense variant A/G snv 1.5E-05 26
rs3783553
IL1A
0.667 0.480 2 112774138 3 prime UTR variant -/TGAA delins 26
rs2707765
APC
0.925 0.080 5 112786835 intron variant G/A;C;T snv 3
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1801155
APC
0.649 0.440 5 112839514 missense variant T/A snv 8.0E-06; 2.0E-03 1.2E-03 36
rs565453 0.882 0.160 5 112849696 intron variant A/C;G snv 4
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 79
rs7804372
CAV1
0.716 0.320 7 116554174 intron variant T/A snv 0.27 19
rs10759932
TLR4
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18 15