DisGeNET - a database of gene-disease associations

List of associated variants

Malignant neoplasm of prostate, C0376358

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs114246623	GRM7-AS2 ; GRM7	1.000	0.080	3	6893379	intron variant	G/A;C	snv		4.1E-02	1
rs7706544	HARS1 ; HARS2	1.000	0.080	5	140690563	intron variant	C/T	snv		1.8E-02	1
rs115338764	IK	1.000	0.080	5	140661602	non coding transcript exon variant	G/A	snv	4.4E-03	1.8E-02	1
rs6465654	LMTK2	1.000	0.080	7	98156970	intron variant	G/A	snv		0.36	1
rs62477096	LOC101928283	1.000	0.080	7	125296388	intron variant	A/G	snv		0.19	1
rs6965492	LOC101928283	1.000	0.080	7	125304928	intron variant	G/T	snv		0.19	1
rs12543663	LOC105375751 ; PCAT1	1.000	0.080	8	126912414	intron variant	C/A;T	snv			1
rs10905371	LOC105376397	1.000	0.080	10	8438081	intron variant	A/G	snv		0.26	1
rs10905374	LOC105376397	1.000	0.080	10	8439523	intron variant	G/A	snv		0.25	1
rs7096374	LOC105376397	1.000	0.080	10	8442150	intron variant	C/T	snv		0.25	1
rs7896254	LOC105376397	1.000	0.080	10	8444198	intron variant	G/A	snv		1.9E-02	1
rs2185710	LOC107986636	1.000	0.080	6	113055846	intron variant	A/G	snv		0.51	1
rs4872171	LOC107986930	1.000	0.080	8	23656776	intergenic variant	A/G;T	snv		0.48	1
rs4872172	LOC107986930	1.000	0.080	8	23656830	intergenic variant	T/A;C;G	snv			1
rs13325108	LSAMP	1.000	0.080	3	116671823	intron variant	C/A;G	snv			1
rs1543175	LSAMP	1.000	0.080	3	116668062	intron variant	G/A	snv		0.45	1
rs5991735	MAGED1	1.000	0.080	X	51809788	intron variant	G/A;C	snv			1
rs137852603	MXI1	1.000	0.080	10	110280017	missense variant	A/C	snv			1
rs387906417	MXI1	1.000	0.080	10	110279296	splice donor variant	T/C	snv			1
rs113425597	PCDHA2 ; PCDHA3 ; PCDHA4 ; PCDHA1	1.000	0.080	5	140807616	synonymous variant	G/A;C;T	snv	4.0E-06; 4.4E-03; 4.0E-06		1
rs6880234	PCDHA5 ; PCDHA3 ; PCDHA4 ; PCDHA2 ; PCDHA1 ; PCDHA6 ; PCDHA7	1.000	0.080	5	140836371	missense variant	C/G	snv	4.4E-03	1.6E-02	1
rs61749035	PCDHGA1 ; PCDHGA2	1.000	0.080	5	141339183	missense variant	G/T	snv	3.4E-03	1.4E-02	1
rs16824376	PLCL1	1.000	0.080	2	197819618	intron variant	C/T	snv		0.19	1
rs6707521	PLCL1	1.000	0.080	2	197848507	intron variant	G/A	snv		0.18	1
rs996427	PLCL1	1.000	0.080	2	197820885	intron variant	G/A	snv		0.20	1