Disease: Nasopharyngeal carcinoma
Source: GWASDB ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs4430796
HNF1B
0.790 0.280 17 37738049 intron variant A/G snv 0.52 5
rs7501939
HNF1B
0.776 0.280 17 37741165 intron variant C/T snv 0.41 4
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 3
rs10993994
MSMB
0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54 3
rs2735839 0.827 0.160 19 50861367 upstream gene variant A/C;G snv 3
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 3
rs7014346
CASC8 ; POU5F1B ; PCAT1
0.732 0.240 8 127412547 intron variant A/G snv 0.63 3
rs1016343
PCAT2 ; PCAT1 ; PRNCR1 ; CASC19
0.807 0.240 8 127081052 non coding transcript exon variant C/T snv 0.20 2
rs10896449 0.827 0.200 11 69227200 intergenic variant A/G snv 0.53 2
rs10934853
EEFSEC
0.882 0.160 3 128319530 intron variant C/A snv 0.43 2
rs11228565 0.882 0.160 11 69211113 regulatory region variant G/A snv 0.16 2
rs12500426
PDLIM5
0.851 0.240 4 94593458 intron variant A/C snv 0.54 2
rs12621278
ITGA6
0.790 0.280 2 172446825 intron variant A/G snv 4.9E-02 2
rs1327301 0.882 0.160 X 51467205 downstream gene variant C/T snv 0.29 2
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 2
rs1465618
THADA
0.882 0.160 2 43326810 intron variant T/C snv 0.80 2
rs1512268
LOC107986930
0.851 0.160 8 23668950 intergenic variant T/C snv 0.50 2
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16 2
rs16902094
CASC21 ; PCAT1 ; CASC8
0.882 0.160 8 127308101 intron variant A/G snv 0.15 2
rs17021918
PDLIM5
0.776 0.240 4 94641726 intron variant C/T snv 0.30 2
rs17181170
LINC00506
0.882 0.160 3 87124174 intron variant G/A snv 0.38 2
rs1859962
CASC17
0.882 0.160 17 71112612 intron variant G/T snv 0.56 2
rs2660753 0.790 0.240 3 87061524 intergenic variant T/C snv 0.76 2
rs3123078 0.882 0.160 10 46070851 regulatory region variant G/A snv 0.55 2
rs4242382 0.763 0.240 8 127505328 intergenic variant A/G;T snv 2