Disease: Lumbar disc disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2228570
VDR
0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 99
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34 81
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 64
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs1800587
IL1A
0.620 0.720 2 112785383 upstream gene variant G/A;C snv 0.32 43
rs20575
TNFRSF10A
0.645 0.440 8 23201811 missense variant C/G snv 0.54 0.44 29
rs17561
IL1A
0.672 0.560 2 112779646 missense variant C/A snv 0.27 0.26 23
rs917997 0.701 0.480 2 102454108 downstream gene variant T/A;C snv 20
rs143383
GDF5
0.724 0.320 20 35438203 5 prime UTR variant G/A snv 0.47 17
rs2856836
IL1A
0.763 0.280 2 112774506 3 prime UTR variant A/G snv 0.26 9
rs2073711
CILP
0.807 0.160 15 65201874 missense variant A/G snv 0.56 0.61 7
rs61734651
COL9A3
0.882 0.280 20 62819980 missense variant C/T snv 4.7E-02 4.5E-02 6
rs1337185
COL11A1
0.851 0.160 1 103079209 intron variant C/G;T snv 0.15 5
rs1420106
IL18RAP
0.851 0.200 2 102418584 upstream gene variant A/G snv 0.78 5
rs1254394380
COL11A1
0.882 0.160 1 102888618 stop gained G/A snv 4
rs4871857
TNFRSF10A
0.851 0.200 8 23201811 missense variant C/G snv 4
rs1304037
IL1A
0.882 0.200 2 112774659 3 prime UTR variant T/C snv 0.32 3
rs162509
ADAMTS5 ; MIR4759
0.925 0.160 21 26953456 intron variant C/A;G snv 3
rs226794
ADAMTS5
0.882 0.160 21 26930036 missense variant A/G snv 0.83 0.89 3
rs591058
MMP3
0.882 0.160 11 102840607 intron variant T/C snv 0.58 0.57 3
rs7533552
COL9A2
0.882 0.160 1 40307477 missense variant T/A;C;G snv 3
rs12077871
COL9A2
0.925 0.160 1 40307478 stop gained G/A;T snv 3.1E-02; 4.0E-06 2
rs12722877
COL9A2
0.925 0.160 1 40307451 missense variant G/A;C snv 2
rs34884997
ADAMTS4
0.925 0.160 1 161191082 3 prime UTR variant T/C snv 0.12 2
rs41270041
ADAMTS4
0.925 0.160 1 161191494 missense variant G/C snv 9.1E-02 9.0E-02 2