Disease: High density lipoprotein measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 47
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82 47
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21
rs5744680
POLK
0.851 0.120 5 75584065 intron variant G/A snv 0.55 18
rs116843064
ANGPTL4
0.776 0.160 19 8364439 missense variant G/A snv 1.3E-02 1.5E-02 16
rs1042034
APOB
0.851 0.240 2 21002409 missense variant C/T snv 0.70 0.78 15
rs2954021 1.000 0.040 8 125469835 intron variant A/G snv 0.54 15
rs7679
PCIF1
0.925 0.160 20 45947863 3 prime UTR variant T/C snv 0.13 9
rs115849089 8 20054859 intergenic variant G/A snv 9.8E-02 7
rs12679834
LPL
8 19962922 intron variant T/C snv 9.4E-02 7
rs863750
ZNF664-RFLNA ; RFLNA
12 124020897 intron variant C/T snv 0.53 7
rs112259268 17 43797377 downstream gene variant C/A snv 1.9E-02 6
rs77960347
LIPG
18 49583585 missense variant A/C;G snv 4.0E-06; 8.7E-03 6
rs1126930
PRKAG1 ; DDN-AS1
12 49005349 missense variant G/C snv 2.1E-02 2.1E-02 5
rs3768321
PABPC4 ; PABPC4-AS1
1.000 0.080 1 39570256 intron variant G/T snv 0.14 5
rs55747707
MLXIPL
7 73623036 intron variant G/A snv 0.16 5
rs72959041
RSPO3
6 127133748 intron variant G/A snv 3.2E-02 5
rs12145743
RRNAD1
1 156730859 intron variant T/G snv 0.24 4
rs3922628 12 122724748 downstream gene variant T/A;C snv 4
rs7726839
CEP72
5 618471 intron variant A/G snv 0.31 4
rs380267 19 54295230 upstream gene variant G/A snv 0.82 3