Disease: Coronary heart disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1169288
HNF1A-AS1 ; HNF1A
0.776 0.160 12 120978847 missense variant A/C;T snv 0.35 21
rs157580
TOMM40
0.882 0.160 19 44892009 intron variant G/A snv 0.69 14
rs2228671
LDLR
0.790 0.160 19 11100236 stop gained C/A;G;T snv 1.6E-05; 8.9E-02 14
rs2954029 0.807 0.160 8 125478730 intron variant A/T snv 0.42 14
rs3798220
LPA
0.732 0.160 6 160540105 missense variant T/C snv 5.6E-02 3.1E-02 16
rs515135 0.807 0.160 2 21063185 intergenic variant T/C snv 0.73 9
rs562338 0.807 0.160 2 21065449 intergenic variant A/G snv 0.69 21
rs6882076
TIMD4
0.827 0.160 5 156963286 upstream gene variant T/C snv 0.56 9
rs1042031
APOB
0.790 0.200 2 21002881 stop gained C/A;T snv 8.0E-06; 0.15 11
rs17321515 0.776 0.200 8 125474167 intron variant A/G snv 0.49 16
rs174546
FADS1 ; FADS2
0.807 0.200 11 61802358 3 prime UTR variant C/T snv 0.28 17
rs174570
FADS2
0.882 0.200 11 61829740 intron variant C/T snv 0.15 11
rs2650000
HNF1A-AS1
0.851 0.200 12 120951159 intron variant A/C snv 0.70 10
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 25
rs11206510 0.763 0.240 1 55030366 intergenic variant T/A;C;G snv 16
rs4803750
BCL3
0.807 0.240 19 44744370 upstream gene variant A/G snv 7.7E-02 22
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 25
rs11065987 0.807 0.280 12 111634620 intergenic variant A/G snv 0.29 17
rs2303790
CETP
0.724 0.280 16 56983380 missense variant A/G snv 2.6E-03 6.5E-04 19
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs3846662
HMGCR
0.763 0.280 5 75355259 non coding transcript exon variant A/G snv 0.50 0.58 12
rs562556
PCSK9
0.827 0.280 1 55058564 missense variant G/A snv 0.86 0.83 8
rs5742904
APOB
0.689 0.280 2 21006288 missense variant C/A;T snv 2.8E-04 7.3E-04 22
rs10455872
LPA
0.662 0.320 6 160589086 intron variant A/G snv 4.3E-02 33
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 28