DisGeNET - a database of gene-disease associations

List of shared variants

Serum LDL cholesterol measurement, C0428474

Disease: Alcohol consumption

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs780094	GCKR	0.658	0.400	2	27518370	intron variant	T/C	snv		0.67	62
rs11591147	PCSK9	0.677	0.360	1	55039974	missense variant	G/A;T	snv	1.2E-02		28
rs17696736	NAA25	0.827	0.240	12	112049014	intron variant	A/G	snv		0.30	18
rs2954021		1.000	0.040	8	125469835	intron variant	A/G	snv		0.54	15
rs7528419	CELSR2	0.851	0.080	1	109274570	3 prime UTR variant	A/G	snv		0.23	13
rs4299376	LOC102725159 ; ABCG8	0.851	0.120	2	43845437	intron variant	G/C;T	snv			11
rs1531517		1.000	0.080	19	44738916	intergenic variant	G/A	snv		0.11	7
rs2304128	GMIP			19	19635342	intron variant	G/C;T	snv			5
rs4722551	LOC105375199			7	25952206	upstream gene variant	T/C;G	snv			5
rs2328223				20	17865277	intergenic variant	A/C;G;T	snv			3