DisGeNET - a database of gene-disease associations

List of shared variants

Dementia, C0497327

Disease: Alzheimer's Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1010159	SORL1	0.882	0.080	11	121612692	non coding transcript exon variant	C/T	snv	0.55	0.55	3
rs104893877	SNCA	0.614	0.360	4	89828149	missense variant	C/T	snv			59
rs104894002	LOC105375056 ; TREM2	0.790	0.320	6	41161557	stop gained	G/A	snv	2.0E-05	2.1E-05	7
rs1057518919	PSEN1	0.851	0.120	14	73171023	missense variant	T/G	snv			5
rs11136000	CLU	0.752	0.160	8	27607002	intron variant	T/C	snv		0.56	19
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs1233347077	APOE	0.851	0.160	19	44905894	missense variant	G/C	snv		7.0E-06	4
rs1416580204	MOK	0.608	0.720	14	102250837	missense variant	C/T	snv	4.0E-06	7.0E-06	49
rs17070145	WWC1	0.790	0.120	5	168418786	intron variant	C/T	snv		0.43	10
rs17125721	PSEN1	0.763	0.120	14	73206470	missense variant	A/G	snv	1.5E-02	1.5E-02	14
rs1799724	LTA ; TNF	0.600	0.680	6	31574705	upstream gene variant	C/T	snv		8.5E-02	47
rs1799752	ACE	0.677	0.480	17	63488529	intron variant	-/TTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCATACAGTCACTTTT	delins			25
rs1799983	NOS3	0.430	0.880	7	150999023	missense variant	T/A;G	snv	0.75		246
rs1800587	IL1A	0.620	0.720	2	112785383	upstream gene variant	G/A;C	snv		0.32	43
rs1801282	PPARG	0.500	0.840	3	12351626	missense variant	C/G	snv	0.11	8.9E-02	131
rs1805054	HTR6	0.708	0.200	1	19666020	synonymous variant	C/T	snv	0.15; 8.0E-06	0.16	17
rs1805087	MTR	0.496	0.800	1	236885200	missense variant	A/G	snv	0.20	0.21	135
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv			121
rs193922916	APP	0.827	0.080	21	25897619	missense variant	G/A;C	snv			6
rs2070600	AGER	0.561	0.760	6	32183666	missense variant	C/T	snv	5.3E-02	3.6E-02	82
rs223330	CISD2	0.851	0.160	4	102872502	intron variant	T/A;C	snv			4
rs223331	CISD2	0.851	0.160	4	102872408	intron variant	T/A;C	snv			5
rs2298813	SORL1	0.790	0.120	11	121522975	missense variant	G/A;T	snv	7.2E-02; 4.0E-06		7
rs2306604	TFAM	0.827	0.080	10	58388932	intron variant	A/C;G;T	snv			5
rs242557	MAPT	0.752	0.200	17	45942346	intron variant	G/A	snv		0.36	12