Disease: Esophageal Neoplasms
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2273535
AURKA
0.645 0.360 20 56386485 missense variant A/C;T snv 0.28 38
rs2273953
TP73
0.851 0.120 1 3682336 5 prime UTR variant G/A;T snv 0.20; 3.3E-04 5
rs2274224
PLCE1-AS1 ; PLCE1
0.882 0.080 10 94279840 missense variant G/A;C snv 8.8E-05; 0.44 6
rs246079
UNG
0.790 0.120 12 109109255 intron variant A/G;T snv 9
rs25489
XRCC1
0.550 0.720 19 43552260 missense variant C/G;T snv 8.5E-06; 7.1E-02 78
rs2854746
IGFBP3
0.752 0.200 7 45921046 missense variant G/A;C;T snv 0.38 14
rs312986 0.925 0.080 18 1898710 intron variant A/G;T snv 3
rs31563 0.851 0.160 5 135899917 intron variant C/A;T snv 5
rs31564
IL9
0.925 0.080 5 135894564 intron variant G/A;T snv 3
rs3176352
CDKN1A
0.807 0.120 6 36684562 intron variant C/A;G;T snv 8.0E-06; 0.37; 2.0E-05 7
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs353163
UBA6-AS1 ; TMPRSS11A
0.882 0.080 4 67919056 missense variant T/A;C;G snv 0.67 4
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4939827
SMAD7
0.708 0.160 18 48927093 intron variant T/A;C snv 25
rs583522
WAKMAR2 ; TNFAIP3
0.925 0.080 6 137868747 intron variant C/A;T snv 3
rs6505162
NSRP1 ; MIR3184 ; MIR423
0.695 0.320 17 30117165 5 prime UTR variant A/C;T snv 0.50; 3.1E-05 25
rs698
ADH1C ; ADH1B
0.724 0.240 4 99339632 missense variant T/A;C snv 0.35 20
rs727503094
LRRC56 ; HRAS
0.633 0.440 11 534287 missense variant GC/AG;AT;TA;TT mnv 41
rs750408412
CYP2E1
0.925 0.080 10 133538938 missense variant A/G snv 3
rs752742313
PIK3CB
0.637 0.320 3 138655502 missense variant C/T snv 1.2E-05 36
rs753225272
FAT4
0.925 0.080 4 125491730 missense variant C/G;T snv 8.0E-06; 4.0E-06 3
rs756826500
ERCC1
0.925 0.080 19 45413705 missense variant G/A snv 4.0E-06 5
rs762846821
TP53
0.614 0.320 17 7675151 missense variant C/A;T snv 8.0E-06 57
rs767551092
XPC
0.790 0.200 3 14164838 missense variant G/A snv 4.0E-06 10
rs770728618
IL17D
0.925 0.080 13 20721723 missense variant G/C;T snv 5.3E-05 3