Disease: High density lipoprotein measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 45
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs13107325
SLC39A8
0.776 0.520 4 102267552 missense variant C/A;T snv 4.0E-06; 4.5E-02 34
rs1421085
FTO
0.752 0.280 16 53767042 intron variant T/C snv 0.31 28
rs1558902
FTO
0.827 0.120 16 53769662 intron variant T/A snv 0.31 21
rs12229654 0.763 0.320 12 110976657 intergenic variant T/G snv 4.8E-03 20
rs1121980
FTO
0.807 0.240 16 53775335 intron variant G/A;C snv 18
rs2943634 0.763 0.200 2 226203364 intergenic variant A/C;G snv 15
rs4841132
LOC157273
8 9326086 non coding transcript exon variant A/G snv 0.89 14
rs12970134 0.790 0.280 18 60217517 intergenic variant G/A snv 0.21 13
rs10968576
LINGO2
0.882 0.120 9 28414341 intron variant A/G snv 0.26 10
rs7607980
COBLL1
1.000 0.080 2 164694691 missense variant T/C snv 0.11 0.13 8
rs3822072
FAM13A
4 88820118 intron variant G/A;C snv 5
rs731839
PEPD
19 33408159 intron variant G/A snv 0.63 5
rs9816226
DGKG
1.000 0.080 3 186116710 intron variant A/T snv 0.82 5
rs4691380
PDGFC
4 156798972 intron variant C/T snv 0.45 4