Disease: Osteosarcoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1005464
BMP2
0.882 0.040 20 6775501 intron variant G/A snv 0.19 5
rs10208273 0.882 0.040 2 6383862 intergenic variant A/G snv 0.30 3
rs1052667
ARHGAP35
0.882 0.040 19 47004177 3 prime UTR variant C/G;T snv 6
rs1061970
COL1A1
0.882 0.040 17 50184491 3 prime UTR variant A/G snv 0.13 3
rs11177386
MDM2
0.882 0.040 12 68820362 missense variant G/A snv 3
rs121913282
PIK3CA
0.882 0.040 3 179221072 missense variant A/C snv 4
rs1223868338
ACTA2 ; FAS
0.882 0.040 10 88990884 missense variant G/C snv 7.0E-06 3
rs1226994105
PIK3CG
0.882 0.040 7 106868379 missense variant G/A snv 8.0E-06 5
rs12879262
MIR4309
0.882 0.040 14 102539710 non coding transcript exon variant G/C snv 0.12 0.11 3
rs1295925
VMP1
0.882 0.040 17 59832902 intron variant T/C snv 0.60 3
rs1690916
MDM2
0.882 0.040 12 68841626 3 prime UTR variant G/A snv 0.35 4
rs16948627
ITGA3
0.882 0.040 17 50063432 intron variant C/A;T snv 4
rs17111750 0.882 0.040 14 20442249 downstream gene variant C/T snv 0.30 3
rs17206779
ADAMTS6
0.882 0.040 5 65151950 splice region variant C/G;T snv 0.48 3
rs1906953
GRM4
0.882 0.040 6 34068669 intron variant C/T snv 0.25 4
rs199812774
MDM2
0.882 0.040 12 68839357 synonymous variant T/C snv 1.8E-04 2.4E-04 3
rs201821879
MDM2
0.882 0.040 12 68809237 missense variant C/T snv 1.6E-04 1.9E-04 3
rs2075559
COL1A1
0.882 0.040 17 50189930 intron variant G/A;C;T snv 0.52; 4.0E-06 3
rs2230392
ITGA3
0.882 0.040 17 50078061 missense variant G/A snv 0.14 9.0E-02 4
rs2236947
RASSF1
0.882 0.040 3 50334001 intron variant C/A snv 0.39 3
rs2285524
ITGA3
0.882 0.040 17 50073989 synonymous variant T/C snv 0.21 0.24 4
rs231755 0.882 0.040 2 203888846 regulatory region variant G/C snv 0.11 3
rs235764
BMP2
0.882 0.040 20 6773599 intron variant G/A snv 0.31 3
rs29001322
MMS19
0.882 0.040 10 97462918 non coding transcript exon variant A/C;G snv 3
rs3787547
BCAS1
0.882 0.040 20 54067899 intron variant G/A snv 0.36 3