Disease: Non-Small Cell Lung Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs112295309
SCRIB ; MIR937
1.000 0.080 8 143813896 missense variant T/C;G snv 6.1E-04 3
rs1367644026
KRT5
0.925 0.080 12 52520259 missense variant C/A;T snv 4.0E-06 5
rs1550117
DNMT3A
0.790 0.320 2 25343038 upstream gene variant A/G;T snv 11
rs121913369
BRAF
0.790 0.280 7 140753346 missense variant G/A;C snv 4.0E-06 12
rs4754
SPP1
0.752 0.360 4 87981540 missense variant T/A;C snv 0.32 12
rs281864719
ALK
0.763 0.240 2 29220831 missense variant A/C;G;T snv 14
rs1273593548
PIK3CG
0.716 0.160 7 106867593 missense variant T/G snv 8.4E-06 19
rs2267437
DESI1 ; XRCC6
0.724 0.320 22 41620695 intron variant C/A;G snv 19
rs187115
CD44
0.695 0.320 11 35154612 intron variant T/C snv 0.37 22
rs11134527
MIR218-2 ; SLIT3
0.677 0.400 5 168768351 intron variant G/A snv 0.25 24
rs121913240
KRAS
0.672 0.440 12 25227342 missense variant T/A;C;G snv 24
rs121913338
BRAF
0.677 0.400 7 140753354 missense variant T/A;C;G snv 24
rs876658657
MLH1
0.677 0.280 3 37020356 missense variant A/G snv 4.0E-06 25
rs752021744
PIK3CB
0.689 0.440 3 138759306 missense variant T/C snv 1.2E-05 29
rs1800449
LOX
0.641 0.400 5 122077513 missense variant C/A;T snv 4.0E-06; 0.17 33
rs4646903
CYP1A1
0.630 0.640 15 74719300 downstream gene variant A/G;T snv 0.18 36
rs2241880
SCARNA5 ; ATG16L1
0.627 0.600 2 233274722 missense variant A/G snv 0.45 0.44 37
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37
rs727503094
LRRC56 ; HRAS
0.633 0.440 11 534287 missense variant GC/AG;AT;TA;TT mnv 41
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs401681
CLPTM1L
0.620 0.640 5 1321972 intron variant C/T snv 0.48 42
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46
rs895819
MIR23A ; LOC284454 ; MIR27A ; MIR24-2
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38 46
rs2279744
MDM2
0.605 0.640 12 68808800 intron variant T/G snv 0.31 48
rs121913237
NRAS
0.611 0.560 1 114716126 missense variant C/A;G;T snv 8.0E-06 50