Disease: Malignant neoplasm of breast
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1267969615
ACE
0.532 0.760 17 63490960 missense variant T/C snv 4.0E-06 100
rs11549465
HIF1A-AS3 ; HIF1A
0.597 0.680 14 61740839 missense variant C/T snv 8.8E-02 7.7E-02 55
rs2273535
AURKA
0.645 0.360 20 56386485 missense variant A/C;T snv 0.28 38
rs6504950
STXBP4
0.807 0.120 17 54979110 intron variant G/A snv 0.29 7
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs5743836
TLR9
0.658 0.440 3 52226766 intron variant A/G snv 0.20 31
rs77375493
INSL6 ; JAK2
0.458 0.760 9 5073770 missense variant G/A;T snv 3.5E-04 187
rs34301344
ARL11
0.689 0.400 13 49630893 stop gained G/A snv 9.7E-03 7.9E-03 22
rs1206846668
FOLH1
0.724 0.400 11 49185773 missense variant G/A snv 4.1E-06 16
rs17822931
ABCC11
0.827 0.080 16 48224287 missense variant C/G;T snv 4.0E-06; 0.22 0.13 7
rs1989969
VDR
0.827 0.120 12 47884227 intron variant A/C;G;T snv 0.60 8
rs4987188
MSH2
0.790 0.200 2 47416318 missense variant G/A;T snv 1.3E-02; 2.0E-05 11
rs11615
ERCC1
0.572 0.640 19 45420395 synonymous variant A/G snv 0.50 0.55 62
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs36053993
MUTYH
0.677 0.280 1 45331556 missense variant C/T snv 3.0E-03 3.3E-03 31
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs62625307
BRCA1
0.827 0.200 17 43091933 stop gained G/A snv 4.0E-06 8
rs3136797
POLB
0.827 0.120 8 42369287 missense variant C/G snv 1.1E-02 1.1E-02 10
rs132793 0.851 0.160 22 41667677 downstream gene variant A/C;G;T snv 7
rs132770
DESI1 ; XRCC6
0.752 0.320 22 41621260 5 prime UTR variant A/G snv 0.83 14