Disease: Prostate carcinoma
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 213
rs28360317
XRCC4
0.716 0.280 5 83323739 intron variant -/CCT delins 0.24 15
rs3783553
IL1A
0.667 0.480 2 112774138 3 prime UTR variant -/TGAA delins 26
rs1204382931
CYP1B1 ; CYP1B1-AS1
0.790 0.160 2 38075270 missense variant A/C snv 4.3E-06 10
rs2410373 0.851 0.120 8 16066997 intergenic variant A/C snv 0.34 6
rs8004379
NPAS3
0.851 0.120 14 33599495 intron variant A/C snv 0.12 4
rs17879961
CHEK2
0.597 0.480 22 28725099 missense variant A/C;G snv 4.1E-03 45
rs28366003
MT2A
0.763 0.240 16 56608579 upstream gene variant A/C;G snv 4.6E-02 10
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 110
rs1799977
MLH1
0.662 0.440 3 37012077 missense variant A/C;G;T snv 0.23 28
rs28897672
BRCA1
0.732 0.280 17 43106487 missense variant A/C;G;T snv 3.2E-05 10
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 28
rs2273535
AURKA
0.645 0.360 20 56386485 missense variant A/C;T snv 0.28 37
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 61
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 59
rs10896449 0.827 0.200 11 69227200 intergenic variant A/G snv 0.53 6
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 70
rs1137100
LEPR
0.627 0.640 1 65570758 missense variant A/G snv 0.30 0.25 39
rs1137101
LEPR
0.554 0.760 1 65592830 missense variant A/G snv 0.51 0.50 77
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 17
rs1570360
VEGFA
0.641 0.680 6 43770093 upstream gene variant A/G snv 0.76 38
rs16944
IL1B
0.531 0.920 2 112837290 upstream gene variant A/G snv 0.57 91
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 187
rs17576
MMP9
0.557 0.760 20 46011586 missense variant A/G snv 0.39 0.36 73