DisGeNET - a database of gene-disease associations

List of shared variants

Breast Carcinoma, C0678222

Disease: Malignant Neoplasms

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10109984	PRKDC	0.925	0.080	8	47891114	intron variant	T/C	snv		0.54	4
rs11075995	FTO	0.882	0.080	16	53821379	intron variant	A/T	snv		0.77	5
rs11544331	C7orf50 ; GPER1	0.925	0.080	7	1091775	missense variant	C/T	snv	0.21	0.19	5
rs11552449	AP4B1 ; DCLRE1B	0.925	0.080	1	113905767	missense variant	C/G;T	snv	0.22	0.15	4
rs11780156	PVT1	0.925	0.080	8	128182395	intron variant	C/T	snv		0.13	4
rs1213469537	CAV1	0.882	0.080	7	116559145	missense variant	C/T	snv	4.0E-06	1.4E-05	9
rs1285136498	NR3C1	0.807	0.080	5	143400101	missense variant	G/A	snv			13
rs12945597	TOP3A	0.925	0.080	17	18271367	downstream gene variant	G/A	snv		0.31	4
rs13006529	CASP10	0.851	0.080	2	201217736	missense variant	T/A	snv	0.41	0.42	7
rs151322829	FAN1	0.882	0.080	15	30905792	missense variant	C/G;T	snv	4.2E-03		5
rs1563634	SMCR8 ; TOP3A	0.925	0.080	17	18315490	5 prime UTR variant	T/C;G	snv			4
rs1598859	NFKB1	0.925	0.080	4	102585287	intron variant	T/C	snv		0.34	4
rs16886397	MAP3K1	0.925	0.080	5	56838449	intron variant	A/G	snv		5.8E-02	4
rs16953002	FTO	0.882	0.080	16	54080912	intron variant	G/A	snv		0.19	5
rs1799944	BRCA2	0.882	0.080	13	32337326	missense variant	A/G	snv	5.4E-02	4.5E-02	5
rs1800054	ATM	0.827	0.080	11	108227849	missense variant	C/G;T	snv	7.1E-03		7
rs180177111	PALB2	0.925	0.080	16	23629831	stop gained	G/A	snv	4.0E-06		7
rs1805373	OGG1	0.925	0.080	3	9754824	missense variant	G/A;C	snv	6.6E-03; 4.1E-06		4
rs1805386	LIG4	0.925	0.080	13	108209565	synonymous variant	A/G	snv	0.13	0.14	4
rs200075329	ESR1	0.925	0.080	6	151808264	missense variant	T/C	snv	4.4E-03	4.3E-03	4
rs200863613	CDKN2A	0.925	0.080	9	21971061	missense variant	C/A;T	snv	8.5E-05	3.7E-04	6
rs2145048		0.925	0.080	6	36589803	upstream gene variant	C/A	snv		0.24	4
rs2287499	WRAP53 ; TP53	0.925	0.080	17	7688850	missense variant	C/G;T	snv	0.20		4
rs2295079	MTOR	0.925	0.080	1	11262508	5 prime UTR variant	C/G	snv		0.54	4
rs2424908	DNMT3B	0.925	0.080	20	32772577	intron variant	C/T	snv		0.27	4