Disease: Glioblastoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1057519981
TP53
0.689 0.440 17 7674251 missense variant A/C;G;T snv 22
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs17748
TREH ; PHLDB1
0.827 0.080 11 118657714 3 prime UTR variant C/T snv 0.18 5
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs1801320
RAD51 ; RAD51-AS1
0.742 0.160 15 40695330 5 prime UTR variant G/C snv 0.12 15
rs1982073
TGFB1
0.649 0.640 19 41353016 missense variant G/A;C snv 32
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs375874539
TP53
0.732 0.320 17 7674237 missense variant G/A;C snv 15
rs587777790
PIK3CA
0.732 0.280 3 179199690 missense variant G/A snv 14
rs587780071
TP53
0.732 0.240 17 7674951 missense variant G/A snv 15
rs760043106
TP53
0.645 0.440 17 7674947 missense variant A/C;G;T snv 32
rs78378222
TP53
0.662 0.360 17 7668434 3 prime UTR variant T/G snv 8.3E-03 37
rs786204929
PTEN
0.752 0.200 10 87933144 stop gained G/A;T snv 12
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1453633223
CDKN2A
0.807 0.080 9 21974503 missense variant C/T snv 4.0E-06 6
rs28934578
TP53
0.605 0.600 17 7675088 missense variant C/A;T snv 4.0E-06 47