Disease: Glioma
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs1044129
AVEN ; RYR3
0.790 0.200 15 33866065 3 prime UTR variant A/G;T snv 9
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 8
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 10
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 213
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 8
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs17024869
NPAS2
0.708 0.320 2 100843581 intron variant T/C snv 8.3E-02 18
rs17748
TREH ; PHLDB1
0.827 0.080 11 118657714 3 prime UTR variant C/T snv 0.18 5
rs1800795
IL6-AS1 ; IL6 ; STEAP1B
0.494 0.840 7 22727026 intron variant C/G snv 0.71 140
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 107
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 81
rs20417
PACERR ; PTGS2
0.576 0.600 1 186681189 non coding transcript exon variant C/G;T snv 57
rs2075685
TMEM167A ; XRCC4
0.724 0.320 5 83076846 intron variant G/A;T snv 14
rs2279115
BCL2
0.724 0.320 18 63319604 5 prime UTR variant G/A;T snv 18
rs2298881
ERCC1
0.653 0.400 19 45423658 intron variant C/A;T snv 25
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 73
rs2853676
TERT
0.667 0.560 5 1288432 intron variant T/A;C snv 23
rs2853677
TERT
0.724 0.240 5 1287079 3 prime UTR variant G/A snv 0.63 15