Disease: Glioma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3213801
POLK
0.882 0.080 5 75581441 synonymous variant C/T snv 0.24 0.22 3
rs17748
TREH ; PHLDB1
0.827 0.080 11 118657714 3 prime UTR variant C/T snv 0.18 5
rs5744533
POLK ; CERT1
0.807 0.120 5 75510279 intron variant C/A;T snv 6
rs7963551
RAD52
0.807 0.160 12 912349 3 prime UTR variant T/G snv 0.13 7
rs1214285376
XRCC1
0.776 0.200 19 43543490 missense variant G/T snv 4.0E-06 8
rs1044129
AVEN ; RYR3
0.790 0.200 15 33866065 3 prime UTR variant A/G;T snv 9
rs7904519
TCF7L2
0.763 0.240 10 113014168 intron variant A/G snv 0.55 9
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs7164773
RORA
0.790 0.240 15 60775749 intron variant C/A;T snv 10
rs1805388
LIG4
0.790 0.120 13 108211243 missense variant G/A snv 0.18 0.16 11
rs786204929
PTEN
0.752 0.200 10 87933144 stop gained G/A;T snv 12
rs1625895
TP53
0.752 0.200 17 7674797 non coding transcript exon variant T/A;C;G snv 9.1E-06; 0.86; 4.5E-06 13
rs2075685
TMEM167A ; XRCC4
0.724 0.320 5 83076846 intron variant G/A;T snv 14
rs2235544
DIO1
0.742 0.240 1 53909897 intron variant C/A;T snv 0.53; 4.0E-06 14
rs1800371
TP53
0.742 0.240 17 7676230 missense variant G/A;T snv 1.2E-03 15
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 16
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 16
rs371074389
LOC112268426 ; CXCR4
0.732 0.320 2 136115226 synonymous variant C/T snv 4.0E-06 4.2E-05 16
rs766914563
LOC112268426 ; CXCR4
0.732 0.320 2 136115082 synonymous variant C/T snv 7.0E-06 16
rs781172058
CXCR4
0.732 0.320 2 136115340 synonymous variant C/T snv 4.0E-06 16
rs1800067
ERCC4
0.716 0.320 16 13935176 missense variant G/A snv 5.6E-02 5.3E-02 17
rs3749474
TMEM165 ; CLOCK
0.724 0.320 4 55434518 3 prime UTR variant C/T snv 0.33 17
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 18