DisGeNET - a database of gene-disease associations

List of shared variants

Breast Carcinoma, C0678222

Disease: Non-Small Cell Lung Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs1799794	XRCC3 ; KLC1	0.763	0.320	14	103712930	splice region variant	T/C	snv	0.22	12
rs1800469	B9D2 ; TGFB1	0.547	0.760	19	41354391	intron variant	A/G	snv	0.69	78
rs187115	CD44	0.695	0.320	11	35154612	intron variant	T/C	snv	0.37	22
rs189037	ATM ; NPAT	0.689	0.400	11	108223106	5 prime UTR variant	G/A	snv	0.49	22
rs1982073	TGFB1	0.649	0.640	19	41353016	missense variant	G/A;C	snv		32
rs2010963	VEGFA	0.542	0.840	6	43770613	5 prime UTR variant	C/G	snv	0.68	82
rs2267437	DESI1 ; XRCC6	0.724	0.320	22	41620695	intron variant	C/A;G	snv		19
rs2279115	BCL2	0.724	0.320	18	63319604	5 prime UTR variant	G/A;T	snv		18
rs2296147	BIVM-ERCC5 ; ERCC5	0.695	0.280	13	102846025	5 prime UTR variant	T/C	snv	0.38	21
rs2298881	ERCC1	0.653	0.400	19	45423658	intron variant	C/A;T	snv		25
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv	0.52	83
rs28381975	PDCD6IP ; LOC105377023	0.827	0.200	3	33798239	intron variant	-/TTACGTACCTGTGCA;TTCCGTACCTGTGCA;TTTCGTACCTGTGCA	delins		5
rs2853669	TERT	0.649	0.320	5	1295234	upstream gene variant	A/G	snv	0.25	35
rs2853677	TERT	0.724	0.240	5	1287079	3 prime UTR variant	G/A	snv	0.63	19
rs3025039	VEGFA	0.576	0.720	6	43784799	3 prime UTR variant	C/T	snv	0.13	62
rs3110697	IGFBP3	0.827	0.160	7	45915430	intron variant	A/G	snv	0.58	7
rs3212227	IL12B	0.566	0.840	5	159315942	3 prime UTR variant	T/G	snv	0.26	65
rs3749474	TMEM165 ; CLOCK	0.724	0.320	4	55434518	3 prime UTR variant	C/T	snv	0.33	17
rs3761548	FOXP3	0.620	0.680	X	49261784	intron variant	G/A;T	snv		42
rs3769821	CASP8	0.851	0.200	2	201258707	intron variant	C/T	snv	0.57	4
rs3835	XRCC5	0.882	0.120	2	216201914	intron variant	G/A	snv	0.21	4
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv		306
rs397517132	EGFR	0.623	0.280	7	55191846	missense variant	A/T	snv		48
rs4402960	IGF2BP2	0.724	0.400	3	185793899	intron variant	G/T	snv	0.38	21
rs4645981	CASP9 ; DNAJC16	0.790	0.160	1	15524988	intron variant	G/A;C	snv		11