Disease: Neoplasms
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1159579789
TP53
0.925 0.080 17 7673578 missense variant T/C snv 4.0E-06 3
rs1169803481
EGFR
0.807 0.160 7 55198851 missense variant A/G snv 4.0E-06 7
rs121434568
EGFR
0.568 0.560 7 55191822 missense variant T/A;G snv 73
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54
rs121909231
PTEN
0.667 0.600 10 87961095 stop gained C/A;T snv 32
rs121912438
SOD1
0.605 0.520 21 31667299 missense variant G/A;C;T snv 1.2E-05; 8.0E-06 58
rs121912664
TP53
0.630 0.320 17 7670699 missense variant C/A;G;T snv 1.2E-05 44
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs121913279
PIK3CA
0.526 0.560 3 179234297 missense variant A/G;T snv 4.0E-06; 4.0E-06 101
rs121913294
PTEN
0.776 0.280 10 87952143 missense variant G/A;C;T snv 8.0E-06 14
rs121913343
TP53
0.611 0.520 17 7673803 missense variant G/A;C;T snv 1.2E-05 44
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs121913470
ERBB2
0.776 0.200 17 39723967 missense variant T/C;G snv 13
rs121913500
IDH1
0.529 0.600 2 208248388 missense variant C/A;G;T snv 4.0E-06 96
rs121913529
KRAS
0.492 0.680 12 25245350 missense variant C/A;G;T snv 4.0E-06 144
rs1219648
FGFR2
0.716 0.320 10 121586676 intron variant A/G;T snv 17
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs1285136498
NR3C1
0.807 0.080 5 143400101 missense variant G/A snv 13
rs1288373809
TP53
0.882 0.120 17 7673255 synonymous variant G/A snv 5.3E-06 5
rs1302103336
CHEK1
0.776 0.120 11 125637491 missense variant T/C snv 8.1E-06 12
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs13283662
UHRF2
0.925 0.080 9 6428530 intron variant T/C snv 4
rs1353702185
MDM2
0.550 0.720 12 68839311 missense variant C/G snv 4.0E-06 79
rs1364963022
ESR1
0.925 0.080 6 151944233 missense variant G/C snv 4.0E-06 4
rs137853007
CHEK2
0.790 0.240 22 28725254 missense variant G/A;T snv 5.2E-05 9