Disease: Glioblastoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs587777790
PIK3CA
0.732 0.280 3 179199690 missense variant G/A snv 14
rs3856806
PPARG
0.637 0.440 3 12434058 synonymous variant C/T snv 0.13 0.11 41
rs786204929
PTEN
0.752 0.200 10 87933144 stop gained G/A;T snv 12
rs1801320
RAD51 ; RAD51-AS1
0.742 0.160 15 40695330 5 prime UTR variant G/C snv 0.12 15
rs660118
SART1
0.807 0.080 11 65967703 missense variant G/C snv 0.46 0.36 6
rs121912438
SOD1
0.605 0.520 21 31667299 missense variant G/A;C;T snv 1.2E-05; 8.0E-06 58
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs1982073
TGFB1
0.649 0.640 19 41353016 missense variant G/A;C snv 32
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1057519981
TP53
0.689 0.440 17 7674251 missense variant A/C;G;T snv 22
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs11540652
TP53
0.592 0.640 17 7674220 missense variant C/A;G;T snv 1.2E-05 57
rs121913343
TP53
0.611 0.520 17 7673803 missense variant G/A;C;T snv 1.2E-05 44
rs28934576
TP53
0.554 0.600 17 7673802 missense variant C/A;G;T snv 4.0E-06; 1.6E-05 78
rs28934578
TP53
0.605 0.600 17 7675088 missense variant C/A;T snv 4.0E-06 47
rs375874539
TP53
0.732 0.320 17 7674237 missense variant G/A;C snv 15
rs55819519
TP53
0.627 0.400 17 7673751 missense variant C/A;G;T snv 1.6E-04 1.3E-04 40
rs587780071
TP53
0.732 0.240 17 7674951 missense variant G/A snv 15
rs760043106
TP53
0.645 0.440 17 7674947 missense variant A/C;G;T snv 32
rs78378222
TP53
0.662 0.360 17 7668434 3 prime UTR variant T/G snv 8.3E-03 37
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213