Disease: Malignant neoplasm of colon and/or rectum
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs376040996
XPA
0.790 0.120 9 97687210 missense variant T/C;G snv 1.2E-05; 2.0E-05 7
rs10506868
VTI1A
0.716 0.160 10 112559621 intron variant C/T snv 3.1E-02 8
rs11196067
VTI1A
0.752 0.160 10 112709306 intron variant A/T snv 0.32 10
rs12241008
VTI1A
0.716 0.160 10 112520943 intron variant T/C snv 0.13 8
rs7086803
VTI1A
0.763 0.160 10 112738717 intron variant G/A snv 0.20 8
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 10
rs3747093
YDJC
0.732 0.200 22 21630090 upstream gene variant G/A snv 0.32 14
rs3757441
EZH2
0.752 0.200 7 148827660 intron variant C/T snv 0.80 12
rs63750447
MLH1
0.716 0.200 3 37025749 missense variant T/A snv 2.7E-03 7.5E-04 17
rs7727691
XRCC4 ; TMEM167A
0.763 0.200 5 83075876 intron variant C/T snv 0.32 9
rs1800371
TP53
0.742 0.240 17 7676230 missense variant G/A;T snv 1.2E-03 15
rs2031920
LOC107984284 ; CYP2E1
0.695 0.240 10 133526341 non coding transcript exon variant C/T snv 3.1E-02 20
rs2075686
TMEM167A ; XRCC4
0.742 0.240 5 83076927 intron variant C/T snv 1.7E-02 13
rs2808630 0.742 0.240 1 159711078 downstream gene variant C/T snv 0.77 13
rs28360071
XRCC4
0.708 0.240 5 83142293 intron variant GATGAGGAAACTAACTCTCAGTGGTGTTTA/- delins 0.48 18
rs3813867
LOC107984284 ; CYP2E1
0.732 0.240 10 133526101 intron variant G/A;C snv 13
rs7904519
TCF7L2
0.763 0.240 10 113014168 intron variant A/G snv 0.55 8
rs9350
EXO1
0.742 0.240 1 241885372 missense variant C/T snv 0.21 0.19 16
rs941759532
ERCC4
0.763 0.240 16 13932175 missense variant C/G snv 11
rs10012
CYP1B1 ; CYP1B1-AS1
0.716 0.280 2 38075247 missense variant G/C snv 0.31 0.36 16
rs28360317
XRCC4
0.716 0.280 5 83323739 intron variant -/CCT delins 0.24 15
rs369410616
MUTYH
0.752 0.280 1 45329400 missense variant C/T snv 2.0E-05 2.8E-05 10
rs3734091
XRCC4
0.689 0.280 5 83204915 missense variant G/T snv 2.3E-02 1.4E-02 19
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs876658657
MLH1
0.677 0.280 3 37020356 missense variant A/G snv 4.0E-06 24