DisGeNET - a database of gene-disease associations

List of shared variants

Carcinoma of lung, C0684249

Disease: Malignant neoplasm of ovary

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs10069690	TERT	0.595	0.560	5	1279675	intron variant	C/T	snv	0.36	53
rs10505477	CASC8 ; PCAT1 ; POU5F1B	0.658	0.400	8	127395198	intron variant	A/G	snv	0.40	31
rs1056836	CYP1B1	0.581	0.680	2	38071060	missense variant	G/C	snv	0.51	58
rs1057519847	EGFR	0.570	0.560	7	55191821	missense variant	CT/AG	mnv		72
rs1057519848	EGFR	0.570	0.560	7	55191822	missense variant	TG/GT	mnv		72
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs1131691022	TP53	0.827	0.160	17	7670685	frameshift variant	GG/A;G	delins		6
rs121434568	EGFR	0.568	0.560	7	55191822	missense variant	T/A;G	snv		73
rs121913286	PIK3CA	0.677	0.280	3	179218306	missense variant	C/A;G	snv		23
rs121913377	BRAF	0.354	0.840	7	140753335	missense variant	CA/AT;TT	mnv		480
rs1222213359	VEGFA	0.574	0.720	6	43770966	missense variant	G/A	snv		62
rs1321845532	TP53	0.851	0.160	17	7670685	frameshift variant	GG/A;G	delins		4
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv		78
rs1760944	OSGEP ; APEX1	0.672	0.480	14	20454990	non coding transcript exon variant	T/C;G	snv		26
rs1799750	WTAPP1 ; MMP1	0.592	0.760	11	102799765	intron variant	C/-	delins	0.50	48
rs1800734	EPM2AIP1 ; MLH1	0.653	0.400	3	36993455	5 prime UTR variant	G/A	snv	0.22	30
rs1899663	HOTAIR	0.683	0.280	12	53967210	intron variant	C/A	snv	0.28	22
rs2107425	MRPL23 ; H19	0.732	0.280	11	1999845	intron variant	C/T	snv		16
rs2494938	LRFN2	0.752	0.240	6	40568389	intron variant	G/A	snv	0.51	11
rs28362491	LOC105377621 ; NFKB1	0.592	0.720	4	102500998	non coding transcript exon variant	ATTG/-	delins		56
rs3760396	CCL2	0.732	0.280	17	34254422	upstream gene variant	G/C	snv	0.15	13
rs3803662	CASC16	0.662	0.440	16	52552429	non coding transcript exon variant	A/G	snv	0.63	25
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv		306
rs4759314	HOTAIR	0.649	0.440	12	53968051	non coding transcript exon variant	G/A	snv	0.93	31
rs5275	PTGS2	0.583	0.560	1	186673926	3 prime UTR variant	A/G;T	snv		55