DisGeNET - a database of gene-disease associations

List of associated variants

Tardive Dyskinesia, C0686347

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs4790953		0.851	0.160	17	65230912	downstream gene variant	A/C	snv		0.17	4
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	188
rs4880	SOD2	0.500	0.840	6	159692840	missense variant	A/G	snv	0.48	0.47	131
rs334558	LOC107986119 ; GSK3B	0.701	0.320	3	120094435	upstream gene variant	A/G	snv		0.51	20
rs995922697	GPX1	0.724	0.560	3	49357413	missense variant	A/G	snv	4.1E-06		15
rs6438552	GSK3B	0.790	0.280	3	119912967	intron variant	A/G	snv		0.54	9
rs6275	DRD2	0.851	0.160	11	113412755	synonymous variant	A/G	snv	0.64	0.58	7
rs1182593032	NQO1	0.851	0.200	16	69718516	missense variant	A/G	snv			4
rs762551	CYP1A2	0.701	0.400	15	74749576	intron variant	C/A	snv		0.67	23
rs363224	SLC18A2	0.925	0.120	10	117263062	intron variant	C/A	snv		0.48	2
rs905568	LOC107986115	0.925	0.120	3	114232449	non coding transcript exon variant	C/A;G;T	snv			2
rs6318	HTR2C ; LOC105373313	0.623	0.520	X	114731326	missense variant	C/G;T	snv			42
rs1890196	PDE4B	0.925	0.120	1	66337397	intron variant	C/G;T	snv			2
rs6265	BDNF ; BDNF-AS	0.436	0.760	11	27658369	missense variant	C/T	snv	0.19	0.15	272
rs759834365	BDNF-AS ; BDNF	0.448	0.760	11	27658456	missense variant	C/T	snv	1.2E-05		237
rs5443	CDCA3 ; GNB3	0.532	0.760	12	6845711	synonymous variant	C/T	snv	0.36	0.44	106
rs6280	DRD3	0.602	0.520	3	114171968	missense variant	C/T	snv	0.63	0.54	57
rs1805054	HTR6	0.708	0.200	1	19666020	synonymous variant	C/T	snv	0.15; 8.0E-06	0.16	17
rs4532	DRD1	0.827	0.160	5	175443147	5 prime UTR variant	C/T	snv	0.68	0.72	7
rs1322643228	TXNRD1	0.807	0.280	12	104321110	missense variant	C/T	snv		7.1E-06	6
rs5326	DRD1	0.851	0.160	5	175443193	5 prime UTR variant	C/T	snv		0.15	6
rs1231813088	HHEX	0.851	0.160	10	92690015	missense variant	C/T	snv			4
rs1457049406	MIR4761 ; COMT	0.851	0.200	22	19962555	missense variant	C/T	snv			4
rs1045280	ARRB2	0.882	0.160	17	4719343	synonymous variant	C/T	snv	0.71	0.62	3
rs201934979	CYP1A2	0.882	0.160	15	74749838	missense variant	C/T	snv	8.8E-05; 8.0E-06	1.3E-04	3