DisGeNET - a database of gene-disease associations

List of associated variants

Tardive Dyskinesia, C0686347

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs995922697	GPX1	0.724	0.560	3	49357413	missense variant	A/G	snv	4.1E-06		15
rs1806201	GRIN2B	0.776	0.200	12	13564574	synonymous variant	G/A	snv	0.32	0.24	8
rs6438552	GSK3B	0.790	0.280	3	119912967	intron variant	A/G	snv		0.54	9
rs6805251	GSK3B	0.925	0.120	3	119841759	intron variant	T/A;C	snv			4
rs9878473	GSK3B	0.925	0.120	3	119931941	intron variant	T/C	snv		0.54	2
rs3755557	GSK3B ; LOC107986119	0.807	0.280	3	120096110	non coding transcript exon variant	T/A	snv		0.14	6
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	188
rs1231813088	HHEX	0.851	0.160	10	92690015	missense variant	C/T	snv			4
rs2445142	HSPG2	0.925	0.120	1	21899250	intron variant	G/A;C	snv			2
rs878949	HSPG2	0.925	0.120	1	21900598	intron variant	T/C	snv		0.52	2
rs6313	HTR2A	0.562	0.640	13	46895805	synonymous variant	G/A	snv	0.41	0.40	82
rs6314	HTR2A	0.677	0.360	13	46834899	missense variant	G/A	snv	7.9E-02	9.5E-02	23
rs6318	HTR2C ; LOC105373313	0.623	0.520	X	114731326	missense variant	C/G;T	snv			42
rs1805054	HTR6	0.708	0.200	1	19666020	synonymous variant	C/T	snv	0.15; 8.0E-06	0.16	17
rs1800872	IL19 ; IL10	0.495	0.840	1	206773062	5 prime UTR variant	T/G	snv		0.69	119
rs7620754	LOC107986115	0.925	0.120	3	114229128	intron variant	T/C	snv		0.24	2
rs905568	LOC107986115	0.925	0.120	3	114232449	non coding transcript exon variant	C/A;G;T	snv			2
rs334558	LOC107986119 ; GSK3B	0.701	0.320	3	120094435	upstream gene variant	A/G	snv		0.51	20
rs1447119000	LOC112268294 ; CYP2D6 ; NDUFA6-DT	0.925	0.120	22	42130763	missense variant	G/A	snv			2
rs1457049406	MIR4761 ; COMT	0.851	0.200	22	19962555	missense variant	C/T	snv			4
rs1065852	NDUFA6-DT ; LOC112268294 ; CYP2D6	0.695	0.360	22	42130692	missense variant	G/A	snv	0.21	0.19	19
rs76980269	NOS1	0.763	0.280	12	117330794	synonymous variant	G/A	snv	2.8E-05	4.2E-05	10
rs1800566	NQO1	0.576	0.680	16	69711242	missense variant	G/A	snv	0.25	0.21	59
rs1258159645	NQO1	0.630	0.600	16	69711128	missense variant	G/A	snv		7.0E-06	37
rs1182593032	NQO1	0.851	0.200	16	69718516	missense variant	A/G	snv			4