DisGeNET - a database of gene-disease associations

List of associated variants

Secondary malignant neoplasm of lymph node, C0686619

Source: BEFREE ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1799817	INSR	0.851	0.200	19	7125286	synonymous variant	G/A	snv	0.23	0.21	4
rs61573157	ADAMTS14	0.882	0.160	10	70760503	missense variant	C/T	snv	8.6E-02	7.5E-02	6
rs12774070	ADAMTS14	0.925	0.120	10	70753879	missense variant	C/A;G	snv	0.23	0.19	4
rs2105269	GALNT16	0.882	0.120	14	69280517	intron variant	A/G	snv		0.35	4
rs7186053	CDH1	1.000	0.080	16	68805390	intron variant	A/G	snv		0.69	1
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	187
rs10889677	IL23R	0.627	0.720	1	67259437	3 prime UTR variant	C/A	snv		0.27	40
rs746429	SIPA1	0.882	0.120	11	65649963	synonymous variant	G/A	snv	0.31	0.30	8
rs931127	SIPA1 ; PCNX3	0.790	0.160	11	65637829	upstream gene variant	G/A	snv		0.49	12
rs767741751	MCPH1 ; ANGPT2	0.851	0.120	8	6562846	missense variant	C/A	snv	4.0E-06		5
rs3020449	ESR2	0.807	0.200	14	64306674	intron variant	A/G;T	snv			10
rs1256054	ESR2	0.882	0.120	14	64249595	synonymous variant	G/C	snv	2.8E-03	9.6E-04	3
rs11600655	PLAAT3	0.925	0.120	11	63606853	intron variant	G/C	snv		0.27	2
rs1800477	BCL2	0.763	0.480	18	63318540	missense variant	C/T	snv	1.8E-02	4.9E-03	12
rs10877887	LINC01465 ; MIRLET7I	0.701	0.440	12	62603400	non coding transcript exon variant	T/C	snv		0.42	18
rs174538	TMEM258 ; MIR611 ; FEN1	0.701	0.440	11	61792609	5 prime UTR variant	G/A	snv	0.34	0.26	19
rs4671393	BCL11A	0.790	0.400	2	60493816	intron variant	A/C;G	snv			9
rs11886868	BCL11A	0.752	0.280	2	60493111	intron variant	C/T	snv		0.65	11
rs1292037	VMP1 ; MIR21	0.827	0.200	17	59841547	3 prime UTR variant	T/C	snv		0.18	6
rs514049	ADAM10	0.827	0.160	15	58750164	intron variant	C/A	snv		0.57	6
rs653765	ADAM10	0.763	0.240	15	58749813	upstream gene variant	T/C;G	snv		0.45	10
rs2064863	AURKA	0.925	0.120	20	56387716	intron variant	T/A;C;G	snv			4
rs6024836	FAM210B ; AURKA	0.851	0.160	20	56369012	downstream gene variant	G/A	snv		0.42	6
rs3801004	FSCN1	0.882	0.120	7	5598591	intron variant	C/A;G;T	snv			3
rs8105637	TINCR	0.925	0.120	19	5566221	intron variant	A/G	snv		0.56	2