Disease: Breast Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1045411
HMGB1
0.708 0.360 13 30459095 3 prime UTR variant C/T snv 0.20 18
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs10511729
LOC101929563
0.742 0.240 9 23557229 intron variant T/G snv 0.35 11
rs1057519847
EGFR
0.570 0.560 7 55191821 missense variant CT/AG mnv 72
rs1057519848
EGFR
0.570 0.560 7 55191822 missense variant TG/GT mnv 72
rs10811474 0.742 0.240 9 21114238 intergenic variant A/G snv 0.44 11
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27 40
rs11134527
MIR218-2 ; SLIT3
0.677 0.400 5 168768351 intron variant G/A snv 0.25 24
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1143623
IL1B
0.677 0.440 2 112838252 upstream gene variant C/G snv 0.24 29
rs1143627
IL1B
0.605 0.760 2 112836810 5 prime UTR variant G/A snv 0.56 47
rs121434568
EGFR
0.568 0.560 7 55191822 missense variant T/A;G snv 73
rs12255372
TCF7L2
0.667 0.480 10 113049143 intron variant G/A;T snv 28
rs12683422
LINGO2
0.742 0.240 9 27969442 intron variant C/T snv 5.7E-02 11
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs1380576
MDM4
0.763 0.240 1 204519150 intron variant G/C snv 0.57 10
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs1520220
LINC02456 ; IGF1
0.807 0.280 12 102402744 intron variant G/C;T snv 0.76 9
rs1562430
PCAT1 ; CASC8 ; CASC21 ; POU5F1B
0.807 0.160 8 127375606 intron variant T/C snv 0.41 6
rs16260
CDH1
0.716 0.440 16 68737131 upstream gene variant C/A snv 0.24 19
rs16944
IL1B
0.531 0.920 2 112837290 upstream gene variant A/G snv 0.57 92
rs17045754
LOC105374610 ; ACYP2
0.790 0.280 2 54269620 intron variant G/A;C snv 7
rs1760944
OSGEP ; APEX1
0.672 0.480 14 20454990 non coding transcript exon variant T/C;G snv 26
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47