Disease: Carcinoma of bladder
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10511729
LOC101929563
0.742 0.240 9 23557229 intron variant T/G snv 0.35 11
rs10811474 0.742 0.240 9 21114238 intergenic variant A/G snv 0.44 11
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs125701
OGG1
0.790 0.160 3 9748794 upstream gene variant G/A snv 0.13 7
rs12683422
LINGO2
0.742 0.240 9 27969442 intron variant C/T snv 5.7E-02 11
rs1799750
WTAPP1 ; MMP1
0.592 0.760 11 102799765 intron variant C/- delins 0.50 48
rs1805192
PPARG
0.510 0.840 3 12379739 missense variant C/G snv 121
rs2031920
LOC107984284 ; CYP2E1
0.695 0.240 10 133526341 non coding transcript exon variant C/T snv 3.1E-02 20
rs20417
PACERR ; PTGS2
0.576 0.600 1 186681189 non coding transcript exon variant C/G;T snv 57
rs2070744
NOS3
0.608 0.680 7 150992991 intron variant C/T snv 0.70 54
rs2243250
IL4
0.570 0.760 5 132673462 upstream gene variant C/T snv 0.35 61
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs243865
MMP2
0.600 0.640 16 55477894 intron variant C/T snv 0.19 48
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs28360071
XRCC4
0.708 0.240 5 83142293 intron variant GATGAGGAAACTAACTCTCAGTGGTGTTTA/- delins 0.48 18
rs3025039
VEGFA
0.576 0.720 6 43784799 3 prime UTR variant C/T snv 0.13 62
rs35592567
TP63
0.827 0.160 3 189896847 3 prime UTR variant C/G;T snv 6
rs3807987
CAV1
0.732 0.280 7 116539780 intron variant G/A snv 7.6E-02 17
rs3810366
ERCC2
0.732 0.280 19 45370684 5 prime UTR variant G/C;T snv 12
rs3834129
CASP8
0.627 0.560 2 201232809 upstream gene variant AGTAAG/- del 0.48 38
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs398652 0.752 0.240 14 56058851 intergenic variant G/A snv 0.24 10
rs4143815
CD274
0.689 0.400 9 5468257 3 prime UTR variant G/C snv 0.23 20
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62