Disease: Malignant neoplasm of breast
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs11655505
NBR2 ; BRCA1
0.776 0.160 17 43126360 intron variant G/A snv 0.31 8
rs121913286
PIK3CA
0.677 0.280 3 179218306 missense variant C/A;G snv 23
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs1271572
ESR2
0.708 0.400 14 64295199 intron variant A/C;T snv 16
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 18
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1467465
THEMIS2
0.827 0.160 1 27884892 non coding transcript exon variant A/G snv 0.61 7
rs153109
IL27
0.623 0.600 16 28507775 intron variant T/C snv 0.43 37
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs17251221
CASR
0.724 0.360 3 122274400 intron variant A/G snv 0.11 18
rs1760944
OSGEP ; APEX1
0.672 0.480 14 20454990 non coding transcript exon variant T/C;G snv 26
rs1801200
ERBB2
0.790 0.200 17 39723335 missense variant A/G;T snv 7
rs1836724
ERBB4
0.807 0.240 2 211380227 3 prime UTR variant G/A snv 0.57 6
rs1899663
HOTAIR
0.683 0.280 12 53967210 intron variant C/A snv 0.28 22
rs2107425
MRPL23 ; H19
0.732 0.280 11 1999845 intron variant C/T snv 16
rs2297235
GSTO2
0.752 0.320 10 104274733 5 prime UTR variant A/G snv 0.22 11
rs2304277
OGG1 ; CAMK1
0.776 0.280 3 9759396 non coding transcript exon variant G/A snv 0.26 8
rs2665390
LOC107986148 ; TIPARP
0.776 0.160 3 156679960 intron variant C/T snv 0.92 8
rs2699887
PIK3CA ; LOC101928739
0.763 0.280 3 179148620 intron variant C/T snv 0.18 11