Disease: Carcinoma of bladder
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1046428
GSTZ1
0.776 0.200 14 77327940 missense variant T/A;C snv 4.0E-06; 0.81 8
rs80357138
BRCA1
0.763 0.200 17 43094776 missense variant C/T snv 8.0E-06 9
rs138213197
HOXB13
0.701 0.240 17 48728343 missense variant C/T snv 1.8E-03 1.6E-03 24
rs874945 0.732 0.240 12 53961667 upstream gene variant C/T snv 0.38 14
rs2107425
MRPL23 ; H19
0.732 0.280 11 1999845 intron variant C/T snv 16
rs2304277
OGG1 ; CAMK1
0.776 0.280 3 9759396 non coding transcript exon variant G/A snv 0.26 8
rs1801516
ATM
0.627 0.400 11 108304735 missense variant G/A snv 0.11 0.11 39
rs20576
TNFRSF10A
0.637 0.400 8 23200707 missense variant T/G snv 0.15 0.14 34
rs4143815
CD274
0.689 0.400 9 5468257 3 prime UTR variant G/C snv 0.23 20
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs121913279
PIK3CA
0.526 0.560 3 179234297 missense variant A/G;T snv 4.0E-06; 4.0E-06 101
rs156697
GSTO2
0.672 0.560 10 104279427 missense variant A/G;T snv 0.35 25
rs4925
GSTO1
0.677 0.560 10 104263031 missense variant C/A snv 0.25 0.23 28
rs153109
IL27
0.623 0.600 16 28507775 intron variant T/C snv 0.43 37
rs121434592
AKT1
0.595 0.640 14 104780214 missense variant C/T snv 4.0E-06 54
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs1048943
CYP1A1
0.533 0.720 15 74720644 missense variant T/A;C;G snv 0.11 5.9E-02 88
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42 72
rs1051740
EPHX1
0.592 0.760 1 225831932 missense variant T/C snv 0.32 0.27 56
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs1799750
WTAPP1 ; MMP1
0.592 0.760 11 102799765 intron variant C/- delins 0.50 48
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242