Disease: Malignant neoplasm of prostate
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs121913286
PIK3CA
0.677 0.280 3 179218306 missense variant C/A;G snv 23
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 18
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36
rs1469713
GATAD2A
0.827 0.160 19 19417997 intron variant A/G snv 0.44 7
rs1544410
VDR
0.542 0.760 12 47846052 intron variant C/A;G;T snv 78
rs1799750
WTAPP1 ; MMP1
0.592 0.760 11 102799765 intron variant C/- delins 0.50 48
rs1899663
HOTAIR
0.683 0.280 12 53967210 intron variant C/A snv 0.28 22
rs200182588
SMC2-AS1 ; SMC2
0.827 0.160 9 104094409 5 prime UTR variant -/GC ins 7.0E-06 6
rs2660753 0.790 0.240 3 87061524 intergenic variant T/C snv 0.76 9
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4143815
CD274
0.689 0.400 9 5468257 3 prime UTR variant G/C snv 0.23 20
rs4759314
HOTAIR
0.649 0.440 12 53968051 non coding transcript exon variant G/A snv 0.93 31
rs5013329
NSUN4
0.827 0.160 1 46349419 intron variant C/T snv 0.23 6
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv 55
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs757210
HNF1B
0.807 0.160 17 37736525 intron variant C/G;T snv 6
rs7937840
INCENP
0.807 0.200 11 62126500 intron variant C/T snv 0.20 7
rs80357796
BRCA1
0.752 0.240 17 43094464 frameshift variant T/- del 11
rs8037137
RCCD1
0.807 0.160 15 90963407 upstream gene variant T/C snv 0.19 8
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213