Disease: Carcinoma of bladder
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02 37
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs4925
GSTO1
0.677 0.560 10 104263031 missense variant C/A snv 0.25 0.23 28
rs80357138
BRCA1
0.763 0.200 17 43094776 missense variant C/T snv 8.0E-06 9
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs953038635
SOD2
0.590 0.800 6 159692720 missense variant G/A;T snv 8.0E-06 51
rs2304277
OGG1 ; CAMK1
0.776 0.280 3 9759396 non coding transcript exon variant G/A snv 0.26 8
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs4143815
CD274
0.689 0.400 9 5468257 3 prime UTR variant G/C snv 0.23 20
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214
rs1024611 0.568 0.800 17 34252769 upstream gene variant A/G snv 0.28 63
rs874945 0.732 0.240 12 53961667 upstream gene variant C/T snv 0.38 14