DisGeNET - a database of gene-disease associations

List of shared variants

Primary malignant neoplasm of lung, C1306460

Disease: Prostate carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs212091	ABCC1	0.827	0.120	16	16142793	3 prime UTR variant	T/A;C	snv			5
rs2239680	BIRC5	0.827	0.120	17	78223702	3 prime UTR variant	T/C	snv	0.27	0.24	5
rs3750861	KLF6	0.827	0.120	10	3782241	intron variant	C/T	snv	8.2E-02	6.6E-02	5
rs9915936	AXIN2	0.827	0.120	17	65537671	synonymous variant	T/C	snv	0.90	0.90	5
rs1571801	DAB2IP	0.827	0.120	9	121665094	intron variant	G/T	snv		0.21	6
rs2071203	SEMA3B	0.827	0.120	3	50274469	missense variant	C/T	snv	0.12	9.9E-02	6
rs2229388	MSR1	0.807	0.120	8	16155139	missense variant	G/A;C	snv	4.0E-06; 0.11		7
rs2645429	FDFT1 ; LOC105379243	0.790	0.120	8	11802542	non coding transcript exon variant	A/G;T	snv			7
rs17021918	PDLIM5	0.776	0.240	4	94641726	intron variant	C/T	snv		0.30	8
rs8102476	SPINT2	0.776	0.240	19	38244973	intron variant	C/T	snv		0.40	8
rs1204382931	CYP1B1 ; CYP1B1-AS1	0.790	0.160	2	38075270	missense variant	A/C	snv	4.3E-06		10
rs760025060	CYP1B1 ; CYP1B1-AS1	0.776	0.200	2	38074936	missense variant	C/T	snv			10
rs7726159	TERT	0.790	0.160	5	1282204	intron variant	C/A	snv		0.29	10
rs7483	GSTM3 ; GSTM5	0.742	0.320	1	109737079	missense variant	C/T	snv	4.0E-06; 0.35	0.26	11
rs2227284	IL4	0.732	0.480	5	132677033	intron variant	T/C;G	snv			12
rs2228526	ERCC6	0.752	0.200	10	49470671	missense variant	T/C	snv	0.22	0.19	13
rs28360317	XRCC4	0.716	0.280	5	83323739	intron variant	-/CCT	delins		0.24	15
rs10012	CYP1B1 ; CYP1B1-AS1	0.716	0.280	2	38075247	missense variant	G/C	snv	0.31	0.36	16
rs213950	CFTR-AS1 ; CFTR	0.716	0.320	7	117559479	missense variant	G/A	snv	0.47	0.57	16
rs2242652	TERT	0.724	0.400	5	1279913	intron variant	G/A	snv		0.18	16
rs7003908	PRKDC	0.716	0.320	8	47858141	intron variant	C/A	snv		0.66	16
rs9350	EXO1	0.742	0.240	1	241885372	missense variant	C/T	snv	0.21	0.19	16
rs16901979	PCAT1 ; CASC19	0.724	0.480	8	127112671	intron variant	C/A	snv		0.16	17
rs1202989817	SOD1 ; LOC102724449	0.716	0.360	21	31659813	missense variant	T/C;G	snv	8.0E-06	7.0E-06	18
rs2240308	AXIN2	0.701	0.360	17	65558473	missense variant	G/A	snv	0.47	0.39	18