DisGeNET - a database of gene-disease associations

List of shared variants

Primary malignant neoplasm of lung, C1306460

Disease: Colorectal Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs3733845	CARMN	0.827	0.120	5	149425083	non coding transcript exon variant	G/A	snv		9.3E-02	5
rs376040996	XPA	0.790	0.120	9	97687210	missense variant	T/C;G	snv	1.2E-05; 2.0E-05		7
rs3814058	NR1I2	0.851	0.120	3	119818444	3 prime UTR variant	T/C	snv		0.28	6
rs9912300	ACLY	0.827	0.120	17	41869011	intron variant	G/A;C;T	snv	4.2E-06; 0.78		5
rs10506868	VTI1A	0.716	0.160	10	112559621	intron variant	C/T	snv		3.1E-02	16
rs10680577	RAB4B-EGLN2 ; EGLN2	0.776	0.160	19	40798690	intron variant	-/TACT	delins			10
rs11196067	VTI1A	0.752	0.160	10	112709306	intron variant	A/T	snv		0.32	10
rs12241008	VTI1A	0.716	0.160	10	112520943	intron variant	T/C	snv		0.13	16
rs2069514		0.807	0.160	15	74745879	upstream gene variant	G/A	snv		0.13	9
rs7086803	VTI1A	0.763	0.160	10	112738717	intron variant	G/A	snv		0.20	9
rs735482	CD3EAP ; ERCC1	0.742	0.160	19	45408744	missense variant	A/C	snv	0.21	0.20	16
rs768873896	MTHFR	0.790	0.160	1	11794822	missense variant	C/G;T	snv	8.0E-06; 2.4E-05		7
rs11196172	TCF7L2	0.708	0.200	10	112967084	intron variant	G/A	snv		0.13	18
rs3733846	CARMN	0.807	0.200	5	149425059	non coding transcript exon variant	T/C	snv		0.19	6
rs3747093	YDJC	0.732	0.200	22	21630090	upstream gene variant	G/A	snv		0.32	16
rs3757441	EZH2	0.752	0.200	7	148827660	intron variant	C/T	snv		0.80	12
rs6068816	CYP24A1	0.752	0.200	20	54164552	synonymous variant	C/T	snv	0.12	8.9E-02	12
rs63750447	MLH1	0.716	0.200	3	37025749	missense variant	T/A	snv	2.7E-03	7.5E-04	17
rs751763046	EXO1	0.790	0.200	1	241885375	missense variant	T/C	snv	4.0E-06		8
rs760025060	CYP1B1 ; CYP1B1-AS1	0.776	0.200	2	38074936	missense variant	C/T	snv			10
rs7727691	XRCC4 ; TMEM167A	0.763	0.200	5	83075876	intron variant	C/T	snv		0.32	9
rs1105879	UGT1A9 ; UGT1A6 ; UGT1A7 ; UGT1A10 ; UGT1A8	0.790	0.240	2	233693556	missense variant	A/C	snv	0.35	0.34	11
rs1800371	TP53	0.742	0.240	17	7676230	missense variant	G/A;T	snv	1.2E-03		15
rs2031920	LOC107984284 ; CYP2E1	0.695	0.240	10	133526341	non coding transcript exon variant	C/T	snv		3.1E-02	20
rs2075686	TMEM167A ; XRCC4	0.742	0.240	5	83076927	intron variant	C/T	snv		1.7E-02	13