DisGeNET - a database of gene-disease associations

List of shared variants

Primary malignant neoplasm of lung, C1306460

Disease: Adenocarcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10937405	TP63	0.807	0.080	3	189665394	intron variant	C/T	snv		0.38	9
rs112290073	TERT	0.882	0.080	5	1285917	intron variant	G/A	snv		7.8E-03	4
rs125555	MBD1	0.882	0.080	18	50273809	missense variant	G/A;C	snv	3.6E-05; 0.19		4
rs1347093	LOC105374690 ; MIR217HG	0.882	0.080	2	56019205	intron variant	G/T	snv		0.21	4
rs138895564	TERT	0.882	0.080	5	1271959	intron variant	C/T	snv		5.1E-03	4
rs1397529	GAB1	0.882	0.080	4	143471009	3 prime UTR variant	A/C;T	snv			4
rs139852726	LPCAT1	0.882	0.080	5	1462734	3 prime UTR variant	G/A;C	snv			4
rs146795390	EGFR	0.827	0.080	7	55191776	missense variant	G/A	snv	8.0E-06	7.0E-06	8
rs199905033	IL6ST	0.882	0.080	5	55964205	missense variant	G/C	snv			4
rs2564978	CD55	0.827	0.080	1	207321071	upstream gene variant	T/C	snv		0.77	6
rs2835267	SETD4 ; LOC100133286	0.827	0.080	21	36074727	intron variant	T/C	snv		0.63	6
rs6495309	CHRNB4 ; CHRNA3	0.807	0.080	15	78622903	upstream gene variant	C/A;T	snv			10
rs12203582	IL17F	0.827	0.120	6	52240759	intron variant	G/A;T	snv			7
rs2073664	DKK4	0.851	0.120	8	42374268	synonymous variant	G/A	snv	0.14	0.25	5
rs2279574	DUSP6	0.827	0.120	12	89351700	missense variant	C/A;T	snv	0.52		8
rs33917957	MET	0.790	0.120	7	116700208	missense variant	A/G	snv	2.7E-02	1.8E-02	10
rs397517108	EGFR ; EGFR-AS1	0.790	0.120	7	55181312	missense variant	GC/TT	mnv			9
rs61748181	TERT	0.827	0.120	5	1294051	missense variant	C/T	snv	2.2E-02	2.2E-02	10
rs121913465	EGFR ; EGFR-AS1	0.763	0.160	7	55181312	missense variant	G/T	snv			11
rs3087386	REV1	0.790	0.160	2	99439044	missense variant	A/G	snv	0.58	0.61	8
rs3136038	ERCC4	0.763	0.200	16	13919522	upstream gene variant	C/T	snv		0.36	13
rs2853677	TERT	0.724	0.240	5	1287079	3 prime UTR variant	G/A	snv		0.63	19
rs372043866	ERBB2	0.732	0.240	17	39727965	missense variant	G/A;C;T	snv	3.2E-05; 2.4E-05; 1.2E-05		18
rs4072037	MUC1	0.732	0.240	1	155192276	splice acceptor variant	C/A;T	snv	0.59		22
rs140693	MBD4	0.763	0.280	3	129436608	missense variant	C/T	snv	5.8E-02	3.1E-02	10