DisGeNET - a database of gene-disease associations

List of shared variants

Adenocarcinoma of large intestine, C1319315

Disease: COLORECTAL CANCER, SUSCEPTIBILITY TO, 10

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs742223	LOC340184	0.790	0.080	6	11705467	upstream gene variant	G/A	snv		5.5E-02	9
rs73208120	NOS1	0.790	0.080	12	117309785	intron variant	T/G	snv		7.1E-02	9
rs4946260	DCBLD1	0.790	0.080	6	117501830	intron variant	C/T	snv		0.61	9
rs2238126	ETV6	0.776	0.080	12	11856807	intron variant	A/G	snv		0.18	10
rs11200014	FGFR2	0.695	0.280	10	121575416	intron variant	G/A;T	snv		0.34	19
rs4836891	OR1J2	0.790	0.080	9	122511295	missense variant	G/A	snv	9.8E-02	6.7E-02	9
rs2070699	EDN1	0.752	0.080	6	12292539	intron variant	G/C;T	snv	0.45		14
rs78368589	SLC6A18	0.776	0.080	5	1240089	intron variant	C/T	snv		4.4E-02	10
rs77776598	SLC6A18	0.790	0.080	5	1240883	intron variant	T/C	snv		5.0E-02	9
rs12659017		0.790	0.080	5	126652483	intergenic variant	G/A	snv		0.27	9
rs10505477	CASC8 ; PCAT1 ; POU5F1B	0.658	0.400	8	127395198	intron variant	A/G	snv		0.40	31
rs12682374	POU5F1B ; PCAT1 ; CCAT2 ; CASC8	0.790	0.080	8	127398703	intron variant	C/A;G;T	snv			9
rs6983267	PCAT1 ; CCAT2 ; CASC8 ; POU5F1B	0.578	0.440	8	127401060	non coding transcript exon variant	G/T	snv		0.37	62
rs7013278	POU5F1B ; CCAT2 ; CASC8 ; PCAT1	0.776	0.080	8	127402647	intron variant	T/C	snv		0.59	10
rs7014346	CASC8 ; POU5F1B ; PCAT1	0.732	0.240	8	127412547	intron variant	A/G	snv		0.63	14
rs4313119		0.776	0.080	8	127559610	intergenic variant	G/T	snv		0.27	10
rs7725218	TERT	0.708	0.280	5	1282299	intron variant	G/A	snv		0.38	17
rs2735940	TERT	0.689	0.400	5	1296371	upstream gene variant	A/G	snv		0.49	25
rs10049390	SLCO2A1	0.776	0.080	3	133982275	intron variant	G/A	snv		0.67	10
rs113569514	SLCO2A1	0.790	0.080	3	134029945	intron variant	T/C	snv		0.23	9
rs61510274	SLCO2A1	0.790	0.080	3	134030671	intron variant	G/A;C	snv			9
rs254563	C5orf66	0.790	0.080	5	135104736	intron variant	G/A;C	snv			9
rs4976270	C5orf66 ; LOC105379188	0.776	0.080	5	135131530	intron variant	C/T	snv		0.44	10
rs639933	C5orf66 ; LOC105379188	0.790	0.080	5	135132061	intron variant	C/A	snv		0.70	9
rs647161	C5orf66	0.776	0.080	5	135163402	intron variant	C/A	snv		0.63	10