Disease: Breast Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs1800469
B9D2 ; TGFB1
0.547 0.760 19 41354391 intron variant A/G snv 0.69 78
rs1222213359
VEGFA
0.574 0.720 6 43770966 missense variant G/A snv 62
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs1143634
IL1B
0.597 0.680 2 112832813 synonymous variant G/A snv 0.19 0.19 52
rs397517132
EGFR
0.623 0.280 7 55191846 missense variant A/T snv 48
rs11571833
BRCA2
0.608 0.360 13 32398489 stop gained A/T snv 6.6E-03 6.0E-03 43
rs555607708
CHEK2
0.667 0.360 22 28695869 frameshift variant G/- del 2.0E-03 1.8E-03 33
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs4246215
FADS2 ; FEN1
0.677 0.320 11 61796827 3 prime UTR variant G/C;T snv 29
rs7679673 0.677 0.440 4 105140377 intron variant C/A snv 0.50 28
rs2735940
TERT
0.689 0.400 5 1296371 upstream gene variant A/G snv 0.49 25
rs1011970
CDKN2B-AS1
0.677 0.320 9 22062135 intron variant G/T snv 0.23 22
rs7931342 0.689 0.360 11 69227030 intergenic variant T/G snv 0.58 20
rs11200014
FGFR2
0.695 0.280 10 121575416 intron variant G/A;T snv 0.34 19
rs115707823 0.701 0.320 6 30374976 intergenic variant G/A snv 19
rs1057941
GBAP1
0.701 0.280 1 155216951 non coding transcript exon variant G/A;T snv 0.46 18
rs11196172
TCF7L2
0.708 0.200 10 112967084 intron variant G/A snv 0.13 18
rs4808075
BABAM1 ; USHBP1
0.701 0.280 19 17279482 intron variant T/C snv 0.26 18
rs56084662
FRY
0.701 0.280 13 32295727 3 prime UTR variant G/A snv 3.5E-03 18
rs75316749
LOC107986051
0.701 0.280 3 169043635 intergenic variant A/G snv 4.2E-02 18
rs11119608
KCNH1
0.708 0.280 1 210816167 intron variant T/G snv 0.21 17
rs11168936
TUBA1C
0.708 0.280 12 49251457 intron variant T/A;C snv 17