Disease: Adenoma of large intestine
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs10936599
MYNN
0.637 0.600 3 169774313 synonymous variant C/T snv 0.29 0.21 32
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs2735940
TERT
0.689 0.400 5 1296371 upstream gene variant A/G snv 0.49 25
rs174537
TMEM258 ; MYRF
0.708 0.400 11 61785208 non coding transcript exon variant G/T snv 0.28 23
rs4444235 0.701 0.240 14 53944201 downstream gene variant T/C snv 0.43 23
rs597808
ATXN2
0.742 0.200 12 111535554 intron variant A/G snv 0.67 19
rs16892766 0.716 0.240 8 116618444 intergenic variant A/C snv 9.3E-02 18
rs174533
MYRF ; TMEM258
0.763 0.160 11 61781553 intron variant G/A snv 0.37 0.29 18
rs10795668
LOC105376400
0.724 0.160 10 8659256 upstream gene variant G/A snv 0.24 17
rs4779584 0.732 0.160 15 32702555 intergenic variant T/C snv 0.67 16
rs9929218
CDH1
0.732 0.160 16 68787043 intron variant G/A snv 0.28 16
rs11727676
HHIP
0.776 0.080 4 144737912 synonymous variant T/C snv 6.6E-02 6.4E-02 14
rs1537372
CDKN2B-AS1
0.752 0.120 9 22103184 intron variant G/A;T snv 14
rs58658771 0.776 0.080 15 32709533 intergenic variant T/A snv 0.20 13
rs7229639
SMAD7
0.763 0.080 18 48924606 intron variant A/G snv 0.87 13
rs10821907 0.776 0.080 10 50888694 upstream gene variant C/T snv 0.20 12
rs4360494
SF3A3
0.776 0.080 1 37990219 upstream gene variant G/C snv 0.45 12
rs4759277
LRP1
0.752 0.160 12 57139907 intron variant C/A snv 0.38 12
rs6058093
PIGU
0.776 0.080 20 34625392 intron variant A/C snv 0.55 12
rs9470361 0.776 0.080 6 36655602 regulatory region variant G/A;T snv 12
rs11255841 0.776 0.080 10 8697617 intergenic variant T/A snv 0.25 11
rs11874392
SMAD7
0.763 0.080 18 48926786 intron variant A/T snv 0.50 11
rs11903757 0.763 0.160 2 191722478 intron variant T/C snv 0.16 11
rs1391441
TET2-AS1 ; TET2
0.763 0.240 4 105207603 intron variant G/A snv 0.70 11