DisGeNET - a database of gene-disease associations

List of associated variants

Chronic Kidney Diseases, C1561643

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs4744712	PIP5K1B	1.000	0.080	9	68819791	intron variant	A/C;T	snv			1
rs571461077	DOK6			18	69609487	intron variant	ATAAATAA/-;ATAA;ATAAATAAATAA;ATAAATAAATAAATAA;ATAAATAAATAAATAAATAA;ATAAATAAATAAATAAATAAATAA	delins			1
rs58206678	DOK6			18	69609487	intron variant	ATAAATAA/-;ATAA;ATAAATAAATAA;ATAAATAAATAAATAA;ATAAATAAATAAATAAATAA;ATAAATAAATAAATAAATAAATAA	delins			1
rs6046	F7	0.925	0.080	13	113118845	missense variant	G/A;C;T	snv	0.13		1
rs6546837	ALMS1			2	73450771	missense variant	G/C;T	snv	0.27		1
rs6865647	PDE4D			5	59103374	intron variant	A/G;T	snv			1
rs911119	CST3	0.807	0.120	20	23632100	non coding transcript exon variant	C/G;T	snv			1
rs3782886	BRAP	0.724	0.480	12	111672685	synonymous variant	T/C	snv	1.9E-02	5.9E-03	7
rs2070600	AGER	0.561	0.760	6	32183666	missense variant	C/T	snv	5.3E-02	3.6E-02	4
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	14
rs16864170		1.000	0.080	2	5767748	intergenic variant	T/C	snv		3.8E-02	1
rs1801282	PPARG	0.500	0.840	3	12351626	missense variant	C/G	snv	0.11	8.9E-02	1
rs1799945	LOC108783645 ; HFE	0.452	0.760	6	26090951	missense variant	C/G;T	snv	0.11	0.10	10
rs968567	FADS2 ; FADS1	0.851	0.240	11	61828092	intron variant	C/T	snv		0.11	3
rs7943728	MYRF ; TMEM258	1.000	0.080	11	61779596	intron variant	G/A	snv	0.12	0.11	1
rs12917707	UMOD	0.827	0.200	16	20356368	upstream gene variant	G/T	snv		0.14	2
rs6428106	LOC105371664			1	192585301	intron variant	G/T	snv		0.14	1
rs267734		0.925	0.120	1	150979001	upstream gene variant	T/C	snv		0.14	1
rs12575381				11	135033566	regulatory region variant	G/A	snv		0.16	1
rs7784820	CD36			7	80420717	intron variant	A/G	snv		0.16	1
rs4293393	UMOD	0.827	0.200	16	20353266	intron variant	A/G	snv		0.20	2
rs2014355	ACADS	0.925	0.120	12	120737721	non coding transcript exon variant	T/C	snv		0.22	1
rs738409	PNPLA3	0.557	0.720	22	43928847	missense variant	C/G	snv	0.28	0.22	5
rs1367117	APOB	1.000	0.080	2	21041028	missense variant	G/A	snv	0.26	0.24	3
rs6581768	LOC105369816			12	67683408	intergenic variant	A/G	snv		0.25	1