Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs9939609
FTO
0.559 0.720 16 53786615 intron variant T/A snv 0.41 98
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs5742909
CTLA4
0.614 0.680 2 203867624 upstream gene variant C/T snv 6.7E-02 40
rs237025
SUMO4 ; TAB2
0.672 0.360 6 149400554 missense variant G/A snv 0.55 0.57 26
rs689
INS ; INS-IGF2
0.776 0.280 11 2160994 splice region variant A/T snv 0.73 0.60 9
rs16840252
CTLA4
0.776 0.480 2 203866796 upstream gene variant C/T snv 0.16 8
rs11755527
BACH2
0.851 0.360 6 90248512 intron variant C/G snv 0.36 5
rs9273368
HLA-DQB1-AS1
0.882 0.120 6 32658698 upstream gene variant G/A snv 0.23 3
rs231806 0.925 0.120 2 203844626 intergenic variant C/G;T snv 2
rs1983890
LOC101928080
1.000 0.120 10 6136651 regulatory region variant C/T snv 0.37 1