DisGeNET - a database of gene-disease associations

List of shared variants

Coronary Artery Disease, C1956346

Disease: Metabolic Syndrome X

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs6507931	LIPG	0.882	0.080	18	49586638	intron variant	C/T	snv		0.52	3
rs1007888	MIF-AS1	0.882	0.120	22	23898914	non coding transcript exon variant	C/T	snv		0.46	4
rs1412444	LIPA	0.851	0.120	10	89243170	intron variant	C/T	snv		0.37	4
rs2291725	GIP	0.882	0.120	17	48961770	missense variant	T/C	snv	0.50	0.40	4
rs10920501		0.827	0.120	1	190092815	downstream gene variant	A/T	snv		0.18	5
rs965384857	LPL	0.827	0.160	8	19954234	missense variant	G/A	snv	4.0E-06		5
rs7819412	XKR6	0.827	0.120	8	11187652	intron variant	G/A;T	snv			6
rs1049673	CD36	0.807	0.160	7	80677034	3 prime UTR variant	C/G;T	snv			7
rs12149545		0.851	0.080	16	56959249	upstream gene variant	G/A	snv		0.23	7
rs2000813	LIPG	0.763	0.200	18	49567494	missense variant	C/A;T	snv	4.0E-06; 0.27; 4.0E-06	0.23	9
rs2236242	SERPINA12	0.776	0.280	14	94493715	intron variant	T/A	snv		0.31	9
rs3732581	PARL	0.790	0.120	3	183840614	missense variant	C/G;T	snv	0.46; 1.2E-05		9
rs6589566	ZPR1	0.882	0.080	11	116781707	intron variant	G/A;C;T	snv			10
rs1320702652	MFAP1	0.752	0.160	15	43824536	missense variant	G/A	snv	4.0E-06		11
rs17300539	ADIPOQ	0.752	0.320	3	186841671	upstream gene variant	G/A	snv		5.3E-02	11
rs173539		0.882	0.080	16	56954132	intergenic variant	C/T	snv		0.33	11
rs185847354	ADIPOQ ; ADIPOQ-AS1	0.763	0.160	3	186854460	missense variant	T/C	snv	3.1E-04	7.0E-05	11
rs3737787	TSTD1 ; USF1	0.763	0.280	1	161039733	3 prime UTR variant	G/A	snv		0.21	11
rs7566605	LOC107985940	0.752	0.320	2	118078449	regulatory region variant	C/G	snv		0.70	11
rs1761667	CD36	0.752	0.320	7	80615623	intron variant	G/A	snv		0.49	12
rs2230774	ROCK2	0.807	0.240	2	11218994	missense variant	G/C;T	snv	0.49		12
rs670	APOA1 ; APOA1-AS	0.763	0.360	11	116837697	5 prime UTR variant	C/T	snv		0.17	13
rs9282541	ABCA1	0.790	0.160	9	104858554	missense variant	G/A	snv	1.3E-02	4.4E-03	13
rs2516839	USF1	0.732	0.320	1	161043331	5 prime UTR variant	C/T	snv		0.49	14
rs11066001	BRAP	0.763	0.360	12	111681367	intron variant	T/C	snv		5.8E-03	15