DisGeNET - a database of gene-disease associations

List of shared variants

Steatohepatitis, C2711227

Disease: Non-alcoholic Fatty Liver Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs72613567	HSD17B13	0.742	0.320	4	87310240	splice donor variant	-/A	delins	0.22		14
rs2645424	FDFT1	0.827	0.120	8	11826954	intron variant	A/C;G	snv		0.56	5
rs1137100	LEPR	0.627	0.640	1	65570758	missense variant	A/G	snv	0.30	0.25	39
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs12980275		0.701	0.360	19	39241143	upstream gene variant	A/G	snv		0.36	23
rs2294918	PNPLA3	0.925	0.040	22	43946236	missense variant	A/G	snv	0.68	0.70	3
rs6834314		0.807	0.160	4	87292656	intergenic variant	A/G	snv		0.24	10
rs2228603	NCAN	0.790	0.360	19	19219115	missense variant	C/A;T	snv	2.8E-05; 5.9E-02		12
rs1800206	PPARA	0.641	0.640	22	46218377	missense variant	C/G	snv	4.3E-02	4.2E-02	35
rs1800795	IL6-AS1 ; IL6 ; STEAP1B	0.494	0.840	7	22727026	intron variant	C/G	snv		0.71	140
rs626283	TMC4 ; MBOAT7 ; LOC112268246	0.827	0.160	19	54173307	upstream gene variant	C/G	snv		0.61	7
rs738409	PNPLA3	0.557	0.720	22	43928847	missense variant	C/G	snv	0.28	0.22	88
rs1799945	LOC108783645 ; HFE	0.452	0.760	6	26090951	missense variant	C/G;T	snv	0.11	0.10	226
rs12137855	LYPLAL1	0.882	0.040	1	219275036	downstream gene variant	C/T	snv		0.19	3
rs12979860	IFNL4	0.547	0.520	19	39248147	intron variant	C/T	snv		0.39	84
rs2854116	APOC3	0.807	0.200	11	116829453	upstream gene variant	C/T	snv		0.51	7
rs56225452	SLC27A5 ; LOC105372486 ; ZBTB45	0.851	0.080	19	58513279	upstream gene variant	C/T	snv		0.18	5
rs58542926	TM6SF2	0.630	0.440	19	19268740	missense variant	C/T	snv	6.5E-02	5.8E-02	42
rs738491	SAMM50 ; PNPLA3	0.882	0.040	22	43958231	intron variant	C/T	snv		0.34	3
rs8192678	PPARGC1A	0.667	0.440	4	23814039	missense variant	C/T	snv	0.31	0.26	28
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs1800777	CETP	0.724	0.280	16	56983407	missense variant	G/A	snv	3.7E-02	2.8E-02	17
rs2143571	SAMM50	0.827	0.080	22	43995806	intron variant	G/A	snv		0.25	5
rs3480	FNDC5	0.807	0.160	1	32862564	3 prime UTR variant	G/A	snv		0.56	8
rs4240624	LOC157273	0.882	0.040	8	9326721	intron variant	G/A	snv		0.87	5