DisGeNET - a database of gene-disease associations

List of shared variants

Steatohepatitis, C2711227

Disease: Non-alcoholic Fatty Liver Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1137100	LEPR	0.627	0.640	1	65570758	missense variant	A/G	snv	0.30	0.25	39
rs12137855	LYPLAL1	0.882	0.040	1	219275036	downstream gene variant	C/T	snv		0.19	3
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	81
rs12979860	IFNL4	0.547	0.520	19	39248147	intron variant	C/T	snv		0.39	84
rs12980275		0.701	0.360	19	39241143	upstream gene variant	A/G	snv		0.36	23
rs13361189		0.752	0.240	5	150843825	upstream gene variant	T/C	snv		0.21	13
rs1420472625	MBOAT7	0.925	0.040	19	54178800	missense variant	G/C	snv			2
rs1799945	LOC108783645 ; HFE	0.452	0.760	6	26090951	missense variant	C/G;T	snv	0.11	0.10	226
rs1800206	PPARA	0.641	0.640	22	46218377	missense variant	C/G	snv	4.3E-02	4.2E-02	35
rs1800234	PPARA	0.807	0.240	22	46219983	missense variant	T/A;C	snv	4.0E-06; 1.1E-02		6
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs1800777	CETP	0.724	0.280	16	56983407	missense variant	G/A	snv	3.7E-02	2.8E-02	17
rs1800795	IL6-AS1 ; IL6 ; STEAP1B	0.494	0.840	7	22727026	intron variant	C/G	snv		0.71	140
rs2070666	APOC3	0.882	0.120	11	116830958	intron variant	T/A;C	snv			4
rs2143571	SAMM50	0.827	0.080	22	43995806	intron variant	G/A	snv		0.25	5
rs2228603	NCAN	0.790	0.360	19	19219115	missense variant	C/A;T	snv	2.8E-05; 5.9E-02		12
rs2241766	ADIPOQ ; ADIPOQ-AS1	0.608	0.720	3	186853103	synonymous variant	T/C;G	snv	8.0E-06; 0.13		48
rs2290602	PPARGC1A	0.882	0.040	4	23824109	intron variant	T/A;G	snv			3
rs2294918	PNPLA3	0.925	0.040	22	43946236	missense variant	A/G	snv	0.68	0.70	3
rs2645424	FDFT1	0.827	0.120	8	11826954	intron variant	A/C;G	snv		0.56	5
rs2854116	APOC3	0.807	0.200	11	116829453	upstream gene variant	C/T	snv		0.51	7
rs2896019	PNPLA3	0.790	0.160	22	43937814	intron variant	T/G	snv		0.20	10
rs3480	FNDC5	0.807	0.160	1	32862564	3 prime UTR variant	G/A	snv		0.56	8
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306