Disease: Primary malignant neoplasm of lung
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1110839
PAX8-AS1 ; PAX8
0.807 0.120 2 113236840 non coding transcript exon variant G/A;C;T snv 6
rs1266828
IL17F
0.807 0.120 6 52243264 intron variant G/A snv 0.75 6
rs3213173
E2F1
0.776 0.120 20 33677440 missense variant C/T snv 1.2E-03 5.1E-03 8
rs3213176
E2F1
0.776 0.120 20 33676869 missense variant C/T snv 1.9E-02; 5.1E-06 1.8E-02 8
rs4769793 0.807 0.120 13 29985289 intergenic variant G/C snv 8
rs4848320
PAX8 ; PAX8-AS1
0.807 0.120 2 113253214 intron variant C/G;T snv 6
rs512715
NEAT1 ; LOC107984338
0.790 0.120 11 65423737 non coding transcript exon variant C/G snv 0.65 7
rs712829
LOC105375284 ; EGFR
0.776 0.120 7 55019062 5 prime UTR variant G/C;T snv 8
rs7248320
CARD8 ; CARD8-AS1
0.776 0.160 19 48256972 non coding transcript exon variant G/A snv 0.65 8
rs768873896
MTHFR
0.790 0.160 1 11794822 missense variant C/G;T snv 8.0E-06; 2.4E-05 7
rs11543848
EGFR
0.790 0.240 7 55161562 missense variant G/A;C;T snv 7
rs213210
MIR219A1 ; RING1
0.742 0.240 6 33208047 upstream gene variant A/C;G snv 11
rs2808630 0.742 0.240 1 159711078 downstream gene variant C/T snv 0.77 13
rs3213245
XRCC1 ; PINLYP
0.742 0.240 19 43575535 5 prime UTR variant G/A snv 0.65 0.60 13
rs1047840
EXO1
0.708 0.280 1 241878999 missense variant G/A snv 0.36 0.40 19
rs140693
MBD4
0.763 0.280 3 129436608 missense variant C/T snv 5.8E-02 3.1E-02 10
rs1899663
HOTAIR
0.683 0.280 12 53967210 intron variant C/A snv 0.28 22
rs3787016
POLR2E
0.677 0.280 19 1090804 intron variant A/G snv 0.78 24
rs560191
TP53BP1
0.763 0.280 15 43475576 missense variant G/C;T snv 0.36; 4.0E-06 12
rs402710
CLPTM1L
0.716 0.320 5 1320607 non coding transcript exon variant C/T snv 0.33 0.38 18
rs752742313
PIK3CB
0.637 0.320 3 138655502 missense variant C/T snv 1.2E-05 36
rs1058808
ERBB2
0.658 0.360 17 39727784 missense variant C/G snv 0.61 0.52 27
rs2069840
IL6 ; IL6-AS1
0.742 0.360 7 22728953 intron variant C/G snv 0.27 13
rs11549467
HIF1A ; HIF1A-AS3
0.653 0.400 14 61740857 missense variant G/A snv 8.9E-03 7.0E-03 30
rs1801270
CDKN1A
0.689 0.400 6 36684194 missense variant C/A;T snv 0.15; 4.4E-05 22