DisGeNET - a database of gene-disease associations

List of shared variants

Sporadic Parkinson disease, C4511452

Disease: Parkinson Disease, Familial, Type 1

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs34637584	LRRK2	0.583	0.480	12	40340400	missense variant	G/A	snv	5.3E-04	3.6E-04	78
rs104893877	SNCA	0.614	0.360	4	89828149	missense variant	C/T	snv			59
rs34778348	LRRK2 ; LOC105369736	0.742	0.120	12	40363526	missense variant	G/A	snv	1.7E-03	5.8E-04	15
rs5030732	UCHL1 ; UCHL1-AS1	0.790	0.160	4	41257616	missense variant	C/A	snv	0.24	0.16	10
rs188286943	VPS35	0.776	0.160	16	46662452	missense variant	C/T	snv			9
rs33949390	LRRK2	0.776	0.160	12	40320043	missense variant	G/A;C;T	snv	1.6E-04; 1.9E-03; 8.0E-06		9
rs142444896	CHCHD2	0.807	0.120	7	56106409	missense variant	G/A	snv	9.3E-03	7.5E-03	6
rs763222239	EIF4G1	0.827	0.040	3	184322862	missense variant	G/A	snv	4.0E-06		5