DisGeNET - a database of gene-disease associations

List of associated variants

Malignant neoplasm of colon and/or rectum, C4722085

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs790056	F11R	0.925	0.080	1	160999795	intron variant	C/T	snv	0.81	0.83	2
rs984907158	FBXO11 ; MSH6	0.925	0.080	2	47799048	synonymous variant	T/C	snv	4.0E-06	2.8E-05	2
rs1063169	FOS	0.925	0.080	14	75280415	5 prime UTR variant	G/T	snv		0.12	2
rs7101	FOS	0.925	0.080	14	75278923	5 prime UTR variant	C/T	snv		0.77	2
rs2335052	GATA2	0.925	0.080	3	128486108	missense variant	C/T	snv	0.20	0.18	2
rs10845671	GPRC5D-AS1	0.925	0.080	12	12926708	upstream gene variant	C/A;T	snv			2
rs4763903	GPRC5D-AS1	0.925	0.080	12	12927706	upstream gene variant	G/C	snv		3.0E-02	2
rs1065411	GSTM2 ; GSTM1	0.925	0.080	1	109690516	missense variant	G/A;C;T	snv	0.36; 6.9E-06		2
rs76328980	HPGDS	0.925	0.080	4	94299521	missense variant	C/T	snv	7.6E-03	1.8E-02	2
rs1176119168	HSPA1B	0.925	0.080	6	31828202	missense variant	G/A;T	snv	1.9E-05		2
rs35060588	IRAK2	0.925	0.080	3	10213318	missense variant	C/G;T	snv	5.5E-02; 1.6E-05		2
rs8058823	ITGAL	0.925	0.080	16	30522581	3 prime UTR variant	A/G	snv		3.0E-02	2
rs147079820	KIF2C	0.925	0.080	1	44758123	missense variant	G/A	snv	4.0E-06		2
rs6695837	LAMC1	0.925	0.080	1	183022327	upstream gene variant	T/C	snv		0.49	2
rs116896264	LGALS4	0.925	0.080	19	38813176	upstream gene variant	G/T	snv		9.0E-02	2
rs73933062	LGALS4	0.925	0.080	19	38812794	5 prime UTR variant	C/T	snv	0.12	9.1E-02	2
rs12477554	LOC105374812 ; TACR1 ; LOC105374811	0.925	0.080	2	75174939	intron variant	A/G;T	snv			2
rs17724534	LOC107984264	0.925	0.080	10	102845764	non coding transcript exon variant	C/T	snv		9.1E-02	2
rs76436997	LOC107984805 ; RORA	0.925	0.080	15	61089054	intron variant	G/A	snv		6.6E-02	2
rs764929269	LOC401463 ; BHLHE22	0.925	0.080	8	64581597	synonymous variant	C/T	snv	1.2E-05		2
rs2281611	MEG8 ; MIR495	0.925	0.080	14	101033612	intron variant	G/A;T	snv			2
rs2308318	MGMT	0.925	0.080	10	129766851	missense variant	G/A	snv	6.2E-04	1.3E-03	2
rs17735387	MIR17HG	0.925	0.080	13	91353800	intron variant	G/A;T	snv			2
rs7318578	MIR17HG	0.925	0.080	13	91353215	intron variant	C/A	snv		0.65	2
rs7549819	MIR200B	0.925	0.080	1	1165623	upstream gene variant	C/T	snv		0.88	2